PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005281.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 368aa MW: 40825.8 Da PI: 8.2221

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005281.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.7	2.2e-53	28	155	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhPtdeelvv+yLkkkv++ +l++ ++i++vd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vl++ + PCP005281.1 28 LPPGFRFHPTDEELVVQYLKKKVTSAPLPV-SIIADVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSgGI 124 79**************************.89***********988899***********************************99556 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kk Lvfy g+ pkg kt+W+mheyrl PCP005281.1 125 QKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 155 77*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MESTDSSTGS QQQQQQPPQP PPPPQPNLPP GFRFHPTDEE LVVQYLKKKV TSAPLPVSII 60 ADVDLYKFDP WELPAKATFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPVLT 120 SGGIQKVGVK KALVFYGGKP PKGIKTNWIM HEYRLADNKP NNKPPGCDLG NKKNSLRLDD 180 WVLCRIYKKN NTHSPMDHER EDSMGDIMGP LMPPSISHVG HHQDMKLHLP KSNLSYGPPF 240 MENDQFFFDG IMSSTDGSAS TPQLPLKRPI VPSLYWNNQE EDDQTAADPS SSKRIQLHQL 300 VTGTNSNGDG INGGATNNNS TSIANLLSQL PQTPSLHQHA VLGSLGDGLF RTPYQLPGRN 360 WYSDSNLG

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MESTDSSTGS QQQQQQPPQP PPPPQPNLPP GFRFHPTDEE LVVQYLKKKV TSAPLPVSII  60
ADVDLYKFDP WELPAKATFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPVLT  120
SGGIQKVGVK KALVFYGGKP PKGIKTNWIM HEYRLADNKP NNKPPGCDLG NKKNSLRLDD  180
WVLCRIYKKN NTHSPMDHER EDSMGDIMGP LMPPSISHVG HHQDMKLHLP KSNLSYGPPF  240
MENDQFFFDG IMSSTDGSAS TPQLPLKRPI VPSLYWNNQE EDDQTAADPS SSKRIQLHQL  300
VTGTNSNGDG INGGATNNNS TSIANLLSQL PQTPSLHQHA VLGSLGDGLF RTPYQLPGRN  360
WYSDSNLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-118	NAC family protein