PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP005203.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 465aa MW: 51025.7 Da PI: 5.7109

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP005203.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9.3e-40	124	184	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s PCP005203.1 124 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 184 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MLETKDPAIK LFGKKIALPA DIDDLGFARP VEKEVEVESE EEDEEEEDAE TEQDSPSRKS 60 TESIEQDDGS PPKTEDPANL EILPDSNVNP KTPSTDEESA QSKTAQTEKE PSTENSEEKT 120 LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKACQR YWTAGGTMRN VPVGAGRRKN 180 KNSASHYRHF TITEALQAAR IDAPNGAYHP ALESNGRVLS FGVDAPICDP MASVLNLADK 240 NVSSSTRNGL HKGEEQVFRA PCKSRENGDD SSSASSVNVS KPHLQNVNSF SSQIPCLPGV 300 LWPYPWNAAV PPPAFCPPGF PLSFCPAPYW NCGVPGTWNV PWFGPQPPSP NQKSPHSSSN 360 SPTLGKHSRD EDVVRPENLD KQEPSRQKNG CVLVPKTLRI DDPSEAAKSS IWATLGIKND 420 SISGKGLFKA FQPKSDQKKI VPETSPAMRA NPAALSRSLN FHESS

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MLETKDPAIK LFGKKIALPA DIDDLGFARP VEKEVEVESE EEDEEEEDAE TEQDSPSRKS  60
TESIEQDDGS PPKTEDPANL EILPDSNVNP KTPSTDEESA QSKTAQTEKE PSTENSEEKT  120
LKKPDKILPC PRCNSMDTKF CYYNNYNVNQ PRHFCKACQR YWTAGGTMRN VPVGAGRRKN  180
KNSASHYRHF TITEALQAAR IDAPNGAYHP ALESNGRVLS FGVDAPICDP MASVLNLADK  240
NVSSSTRNGL HKGEEQVFRA PCKSRENGDD SSSASSVNVS KPHLQNVNSF SSQIPCLPGV  300
LWPYPWNAAV PPPAFCPPGF PLSFCPAPYW NCGVPGTWNV PWFGPQPPSP NQKSPHSSSN  360
SPTLGKHSRD EDVVRPENLD KQEPSRQKNG CVLVPKTLRI DDPSEAAKSS IWATLGIKND  420
SISGKGLFKA FQPKSDQKKI VPETSPAMRA NPAALSRSLN FHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-110	Dof family protein