PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP005050.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 342aa    MW: 37001.6 Da    PI: 10.0825
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP005050.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.87.1e-19205238134
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                  Cs C ttkTplWR+gp+g+k+LCnaCG+++rk +
  PCP005050.1 205 CSDCSTTKTPLWRSGPRGPKSLCNACGIRQRKAR 238
                  *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MTPPPYHNLS PPSPFNLELS GDHDLQYHHL FNLEPQTSLS SSLSSPLFLT PAQVQGRSDD  60
HYREPQQFQF QLLEADHNIV PYGGSRDHDH QAIENEGGNG TVLKLSISKN GAVGSGNPST  120
DHEVNTSSVK WMSSKMRMMR KMSNPDHTSS SSKSSGDKPI SMKLSSHKFE EQKSQHPSSQ  180
LGAEMISCSN NSSNNMNSIP IIRVCSDCST TKTPLWRSGP RGPKSLCNAC GIRQRKARRA  240
MAAAAAAAAA SGTTLTVAAP SMKSSKVQHK DNKSRVSSTV PFKKRPYNKL TSSPSSRGKS  300
KKLCFEAPTA AAATSALQRV FPQDEREAAI LLMALSCGLV HG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.12e-25GATA family protein