PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004880.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 262aa MW: 29617 Da PI: 5.0125

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004880.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	121.6	6.8e-38	24	154	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.k 96 l pGfrF Ptd+ lv++yLk+k++g++ ++ +vi+e+d++k+ePwd+p + +ekew+fFs+ + k +++r+ r+t +g+ k+tg ++e+ ++ + PCP004880.1 24 LLPGFRFCPTDKLLVCYYLKNKIQGTDSHFRSVIPEIDVCKYEPWDIPaFFPEVHEKEWFFFSRPKYKDINKTRRDRTTYQGFYKSTGGEREIRAEeS 121 579*************************999***********545556899*********************************9856 PP NAM 97 gelvglkktLvfykg..rapkgektdWvmheyr 127 ++++g k+ L+f++g r pk++ktdWv+he++ PCP004880.1 122 EAVIGKKRFLTFHEGraRGPKAKKTDWVIHEFT 154 6679*****773367999*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MSSGSSSSNM TTEEGDAVHV NVILLPGFRF CPTDKLLVCY YLKNKIQGTD SHFRSVIPEI 60 DVCKYEPWDI PAFFPEVHEK EWFFFSRPKY KDINKTRRDR TTYQGFYKST GGEREIRAEE 120 SEAVIGKKRF LTFHEGRARG PKAKKTDWVI HEFTEIEVGS FVLCLLKNRS PSYKKPKGDP 180 SYGKLADSGA NSEDNQAAGS DVIPEPVEHL GYKERGDVNS SESCLIDCNN ILSFDDDDDE 240 TGDGKFPDLD DPAASARFLE VR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.2	1e-31	NAC family protein