PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004794.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 384aa MW: 40816.7 Da PI: 8.2286

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004794.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.2	5e-40	42	102	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+al+cprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknkk s PCP004794.1 42 PEQALNCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKIS 102 6899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MMSSDTAPPT KPKHDENPTG GSGSSRPKAT SSSSSGPKLP PPEQALNCPR CDSPNTKFCY 60 YNNYSLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKK ISSSSSSNSR LSCSFDPSKD 120 SAGSSSSENM MLGGLKFFHG ISPAMDFQLG SISRLHNSNQ FSTNLATGIN FNNPFPAFGD 180 VSGTSGLSTS TLEPSSGGGT NACNNSFLGF NYPLTLGGRG GSASGSGGLI SAQNMMSAMN 240 VHSSLASSIE SLSSINQDLH WKLQQQRLAM LFGTEEHDQS TQSQLENQQK TQQMIAPISL 300 FQNLEVSSSP RPDHHQGVSH GRKEGGDTAT EWFFGNAYAP AVTQTPTNGG GGGGGDASNE 360 NASNWPHGIP AWSSHDWQQY NAWP

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MMSSDTAPPT KPKHDENPTG GSGSSRPKAT SSSSSGPKLP PPEQALNCPR CDSPNTKFCY  60
YNNYSLTQPR HFCKTCRRYW TKGGALRNVP IGGGCRKNKK ISSSSSSNSR LSCSFDPSKD  120
SAGSSSSENM MLGGLKFFHG ISPAMDFQLG SISRLHNSNQ FSTNLATGIN FNNPFPAFGD  180
VSGTSGLSTS TLEPSSGGGT NACNNSFLGF NYPLTLGGRG GSASGSGGLI SAQNMMSAMN  240
VHSSLASSIE SLSSINQDLH WKLQQQRLAM LFGTEEHDQS TQSQLENQQK TQQMIAPISL  300
FQNLEVSSSP RPDHHQGVSH GRKEGGDTAT EWFFGNAYAP AVTQTPTNGG GGGGGDASNE  360
NASNWPHGIP AWSSHDWQQY NAWP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	4e-33	Dof family protein