PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004318.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 422aa    MW: 46802.4 Da    PI: 8.9556
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004318.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-192675356
          AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 ++GVr ++ +gr++AeIrd ++    + r++lg+f++aeeAa+a++ a+++l+g+
  PCP004318.1 26 FRGVRKRP-WGRYAAEIRDpWK----KSRVWLGTFDSAEEAARAYDSAARSLRGA 75
                 8*******.**********883....5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MDPTSKSPPP ESRSGDRNPA SNEIRFRGVR KRPWGRYAAE IRDPWKKSRV WLGTFDSAEE  60
AARAYDSAAR SLRGAKAKTN FPASAENLLE RPSGSKGTFN SAEEAARAYD VGPRGLREVK  120
ATADLNLPAP SDHQLERPSG SKRIVQVQQQ LTDTSTVTSL GPPPPSFSAT STTTSSSSSS  180
SSSIEDEIYD VFLSFSGEDT RKTFTDHLYW TLKAARVDAF IEEKESTRGG EEKVSEKVKQ  240
AIQGSKMAVI IFSRRYADST RCLEELVEIM ECKRTIRLMV LPIFYDVDPS DVKNQSGIFA  300
EAFAKHEDHK IEKVGRWRRA ASEAADLAGE VFTKTDGYEG VFIRKVIDDI TGKLKMKSTS  360
LGGATGQSVQ EIRLFGVPLV VDSVGKSDSP SFESSRYPSF RQRFPKGEKY KETPTEPLEC  420
HR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.19e-22ERF family protein