PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP004171.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 122aa MW: 14158.3 Da PI: 8.8761 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.3 | 2.7e-05 | 45 | 67 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F k + ++H +++ PCP004171.1 45 FMCKRCGKAFAVKGDWRTHEKNC 67 89*****************9987 PP | |||||||
2 | zf-C2H2 | 11.1 | 0.0013 | 74 | 90 | 5 | 21 |
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 +Cg F++k +Lk Hi+ PCP004171.1 74 ICGSDFKQKRSLKDHIK 90 8**************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MLRLRCYCCA PGCKHNIDNP RGAKPLKDFR TLQVHYKRKH GVRSFMCKRC GKAFAVKGDW 60 RTHEKNCGKI WYCICGSDFK QKRSLKDHIK ALGRGHGLFD IECFEEEEEP ASEIEHDAEA 120 SR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 2e-58 | C2H2 family protein |