PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP004114.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 548aa MW: 61056.4 Da PI: 5.7165

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP004114.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.8	5.8e-34	38	92	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQkYRl PCP004114.1 38 KPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 92 79****************************************************8 PP
2	Myb_DNA-binding	76.8	2.9e-24	40	91	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++vdav+qlGg+ t+ktI+rtmg kg+tl+++ks++qky+ PCP004114.1 40 RLRWTAELHERFVDAVTQLGGPdkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 91 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MYSAIHSLPL DGHGDFGGSL DGTNLPGDAC LVLTTDPKPR LRWTAELHER FVDAVTQLGG 60 PDKATPKTIM RTMGVKGLTL YHLKSHLQKY RLGKLSCKDS AENSKDGIAA SCIAESQDTG 120 SSSAVSSRVI AQDLNDGYQV TEALRVQMEV QRRLHEQLEV QRRLQLRIEA QSKYLQSILE 180 KACEALNDQA ASAAGVEAAK EELSELAIRV SNDCEGIVPL DSAKIPSLSE IAAALENRDV 240 SNVMARLGNC SVDSCLTSTG SPFSPMDMSS LAAAMKKRQR PFFGNGDSLP LESNMRQEVE 300 WMMSTSHLRS QLKSMSNKVG GMLCCCSSPN KYSRLDAKLE KKMVEVKRGY LGRSNFKSID 360 SIIMRFPQFR EELKKIRDVF EQYDEDSNGT IDREELKKCL QKLQLHLTAE EIEDLFHSCD 420 MDGSEGIQFN EFIVLLCLIY LLKEPSSSHT ISKINSPQLE ATFDTVVEVF SFLDKNGDGK 480 LNKADMVKAL NEASPLEKSP AHVTRTRFKE MDWDKNGKVT FREFLFAFID WVGIDTDEEM 540 SPVRSSSK

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MYSAIHSLPL DGHGDFGGSL DGTNLPGDAC LVLTTDPKPR LRWTAELHER FVDAVTQLGG  60
PDKATPKTIM RTMGVKGLTL YHLKSHLQKY RLGKLSCKDS AENSKDGIAA SCIAESQDTG  120
SSSAVSSRVI AQDLNDGYQV TEALRVQMEV QRRLHEQLEV QRRLQLRIEA QSKYLQSILE  180
KACEALNDQA ASAAGVEAAK EELSELAIRV SNDCEGIVPL DSAKIPSLSE IAAALENRDV  240
SNVMARLGNC SVDSCLTSTG SPFSPMDMSS LAAAMKKRQR PFFGNGDSLP LESNMRQEVE  300
WMMSTSHLRS QLKSMSNKVG GMLCCCSSPN KYSRLDAKLE KKMVEVKRGY LGRSNFKSID  360
SIIMRFPQFR EELKKIRDVF EQYDEDSNGT IDREELKKCL QKLQLHLTAE EIEDLFHSCD  420
MDGSEGIQFN EFIVLLCLIY LLKEPSSSHT ISKINSPQLE ATFDTVVEVF SFLDKNGDGK  480
LNKADMVKAL NEASPLEKSP AHVTRTRFKE MDWDKNGKVT FREFLFAFID WVGIDTDEEM  540
SPVRSSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-126	G2-like family protein