PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP004028.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 295aa    MW: 32144.3 Da    PI: 5.8673
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP004028.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.33.2e-16207244136
         GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36 
                  C +Cg ++  Tp++Rrgp+g+++LCnaCGl+++ +g++
  PCP004028.1 207 CKHCGISSksTPMMRRGPSGPRSLCNACGLFWANRGSM 244
                  *****99999************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MSMYGHSQDM TMPNPIPACD DDDTGAADSI DNAHIQYDSH TLEDGGIVVV EDVSSDGVYV  60
QGGSAGSELR GQPYDGSSQL TLSFRGQVFV FDAVTPEKVQ AVLLLLGGNE LSPSAQGTEL  120
ASQNPRATED FPRCSQPHRA ASLFRFRQKR KERCFDKKVR YGVRQEVALR MQRNKGQFSS  180
SKKSDGDGNW SNGQESGQED THAETFCKHC GISSKSTPMM RRGPSGPRSL CNACGLFWAN  240
RGSMRELSKR SHDVKRTEQG GESDTKDLDS VTAIDAHNNL VPFSNGDNSA LVAEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.21e-86GATA family protein