PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003930.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NF-YB

Protein Properties

Length: 152aa MW: 15861.7 Da PI: 5.9594

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003930.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	177.8	1e-55	32	125	1	94
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 vreqdr+lPian+srimkk+lP+n+ki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfedy+epl++yl++yre + PCP003930.1 32 VREQDRYLPIANISRIMKKALPTNGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLRIYLARYREGD 125 69*****************************************************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence
MAEAPTSPAG GSHESGGEQS PQGGGGGGGG GVREQDRYLP IANISRIMKK ALPTNGKIAK 60 DAKDTVQECV SEFISFVTSE ASDKCQKEKR KTINGDDLLW AMATLGFEDY IEPLRIYLAR 120 YREGDAKGSA RGGDGSSKGN AVPAMPGPSA QV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38880.7	1e-70	NF-YB family protein