PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003781.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 282aa    MW: 31593.2 Da    PI: 7.406
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003781.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA62.35.7e-20204238135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C++C++tkTp+WR+gp g+ktLCnaCG++yr+ +l
  PCP003781.1 204 CAHCQVTKTPQWREGPLGPKTLCNACGVRYRSGRL 238
                  *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDGSLPADGA FNYESFLSTD ILSALDFPME DIDDSVEDND WDTKFQDIEP PPNIDQLLGP  60
GIFSYDDEKK HTNLSTPYGH MYQRPQFPSV TCETIRSRVS LRKDDLESIG SCAAQFEPKF  120
EKRTRSKLSR SRRANPIIFS TQFILSTSSN SSASENLYRW DACEFDLEAS RTEDTSNTAK  180
RKHKKKTGKL STDEAGESRE TKRCAHCQVT KTPQWREGPL GPKTLCNACG VRYRSGRLLP  240
EYRPAASPTF IASVHSNSHK KVIELRSKSC QGASMGILSS GQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.26e-37GATA family protein