PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP003777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 247aa MW: 27945.8 Da PI: 9.7368 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 45.1 | 2.6e-14 | 16 | 100 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergfe..rspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ +laLi+a ++ +l+rg l++++W+ev++++ + +g + ++ +qCk++++ l+k+yk +k ++ st+p++++l+ PCP003777.1 16 CWSEDATLALITAWGDRYLHLNRGILRQKDWKEVADAVnshQNGGAKpfKTDVQCKNRIDTLKKKYKLEKSKPGQ------STWPFYRRLH 100 7*************************************88733444322699****************9999887......58*****997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MDRLTRTHAP AGREDCWSED ATLALITAWG DRYLHLNRGI LRQKDWKEVA DAVNSHQNGG 60 AKPFKTDVQC KNRIDTLKKK YKLEKSKPGQ STWPFYRRLH SIICSTPSNT AGATKSNPRI 120 LALSAKSPDP NTNLLGGSTD SSIRHDDGDD EAAVFEGGAA CRELARAISK FGEMYERIEN 180 SKRKQMMELE KQRMEFDKEL ALQRLSMFMD VQVELGKKMK HSKYSHSSGA AIVQNFNFNL 240 NLFMGFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11100.1 | 3e-55 | Trihelix family protein |