PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP003670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 368aa MW: 41265 Da PI: 8.3178 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.8 | 2.5e-54 | 5 | 131 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeel+++yL++kv++ +++ ++++ vd++k+ePwdLp k++ +ekewyfF rd+ky+tg r+nrat++gyWk+tgkdke+ + g PCP003670.1 5 LPPGFRFHPTDEELITHYLCHKVSDASFTS-KAVAVVDLNKCEPWDLPGKASMGEKEWYFFNLRDRKYPTGLRTNRATEAGYWKTTGKDKEIRR-VGV 100 79*************************999.88***************988999***************************************9.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfykgrap+gek++Wvmheyrle PCP003670.1 101 LVGMKKTLVFYKGRAPRGEKSNWVMHEYRLE 131 *****************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 368 aa Download sequence |
MQESLPPGFR FHPTDEELIT HYLCHKVSDA SFTSKAVAVV DLNKCEPWDL PGKASMGEKE 60 WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIRRVGV LVGMKKTLVF YKGRAPRGEK 120 SNWVMHEYRL ENKHPFKSSK EEWVVCRVFQ KNISALKKPQ QATTSSQKQP TNESPCDDTN 180 SIVNEFGDIE LPNLNSNINA NSSSGFSNNI SSPQSYYSNI LDHSKNNIND VTNMSLKMTW 240 AATAAREAAA NALSLPSSLL SPSNLSVNSL LLRALQLRSS TNNNGSNYQP RATNHVQATA 300 GTSTLDYSSY DHIQQGMMPS MSHHFGSSTT MDHINSNFQA SSSSTNDQMM ESMPLQHSEQ 360 PFNLDSIW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18400.1 | 1e-104 | NAC family protein |