PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003570.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 320aa    MW: 36072.6 Da    PI: 4.8171
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003570.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.2e-13123174155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+++P++   + ++ + a+i   A++++k+L+
  PCP003570.1 123 QRMTHIAVERNRRKQMNEYLSVLRSIMPES---YVQRGDQASIIGGAINFVKELE 174
                  79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MALEAVVFPQ DPFSCTNKDL YNLLGGNLSY VDDQQQASLD FLGYQTDQNY PNYDTYSSPP  60
SMVSHFSELH LSNPNPVGST INPAGDQPEF QLPLEDTINV SSSTRAKRRR AKSKKNEEEI  120
ENQRMTHIAV ERNRRKQMNE YLSVLRSIMP ESYVQRGDQA SIIGGAINFV KELEQEVQFL  180
GVQKPNNRAP FSEFFTFPQY STRSTSDHES TVATMAELPL LECRSSNIAA DIEVTMVESH  240
ASLKVRSKRL PKQLLKIVSG LHDMHLTVLH LNVVTADDIV LYSLSLKVED ECMLTSVDEI  300
ATAVHEMLAR IQEEAMLDLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124135RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-78bHLH family protein