PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP003373.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 377aa    MW: 40371.5 Da    PI: 9.3489
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP003373.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.82.8e-3986146262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
  PCP003373.1  86 PEQALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 146
                  5799******************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MVFSSIPAYL DPANWQQQPN HHHHLTGSNT NNISNNNINN NNSHFLPPPP PPLPSNPHDG  60
CGVGGAGSIR PGSMADRARM ANIPLPEQAL KCPRCESTNT KFCYFNNYSL TQPRHFCKTC  120
RRYWTRGGAL RNVPVGGGCR RNKRSKGTSS SASKSPASSS DRPTCSAGSS GHSNLGLNNS  180
STAGSADNNN MRMSPQIPPL RFMSPFATDM ALNFGMMNNN NSSNYGVGDL NGFHQMGSGL  240
GASGGSLFNF QQQTPSFPFM AGLDPTPAGL MFETSGVEVP GYNQVRPRAP SAGMSISQMA  300
SVKMELESQQ QQQQQQQNQE LNLSRQLLGM NNNSGNDQFW SNGGGRGSGG SSTTTAWTDL  360
LGFNSTSTTS NNINNPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.15e-51Dof family protein