PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003342.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 521aa MW: 55822.1 Da PI: 6.1455

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003342.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.6e-39	158	218	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG +rnvPvG+grrknk+ss PCP003342.1 158 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGIMRNVPVGAGRRKNKNSS 218 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MSSESEGGGH MIKLFGKTIP LAMAPLNRES SSSIDVRYGA VDSEVAATAG GGGGGAEDCS 60 ETSQKLSSSS AATNSREEKS EREEDAQKEE TMSGKELAAD RQHDDDTSDQ ITEDIKAPTA 120 SSGISENPKT PSADRETSSK NGDQSETGSS QDKTLKKPDK ILPCPRCNSM DTKFCYYNNY 180 NVNQPRHFCK NCQRYWTAGG IMRNVPVGAG RRKNKNSSAS QYRHIFMSDA LQAAHASTAN 240 GAHNATLGGN GTVLTFGSDS PLCESMASVL NLAERNQNCM QNGFHGPEQR LLVSPTAGDN 300 GDDRSSGSSI TASNSTERGG RASSQEPSAQ NCQTFPPQVP CFPGSPWPYP WNSAQWASAM 360 PPPGFCHSGF PMSFYPAPPY WGCTVPGPWN VPCLSPSSTL SHCATRSGPN SPTLGKHSRD 420 EDIPNPSSSQ NEEPAKENSS ERCVWIPKTL RIDDPNEAAR SSIWATLGIK NEKGNCTNEG 480 GGLFKAFQSK GDEKNHVVEA SPVLQANPAA FSRSLNFRER T

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MSSESEGGGH MIKLFGKTIP LAMAPLNRES SSSIDVRYGA VDSEVAATAG GGGGGAEDCS  60
ETSQKLSSSS AATNSREEKS EREEDAQKEE TMSGKELAAD RQHDDDTSDQ ITEDIKAPTA  120
SSGISENPKT PSADRETSSK NGDQSETGSS QDKTLKKPDK ILPCPRCNSM DTKFCYYNNY  180
NVNQPRHFCK NCQRYWTAGG IMRNVPVGAG RRKNKNSSAS QYRHIFMSDA LQAAHASTAN  240
GAHNATLGGN GTVLTFGSDS PLCESMASVL NLAERNQNCM QNGFHGPEQR LLVSPTAGDN  300
GDDRSSGSSI TASNSTERGG RASSQEPSAQ NCQTFPPQVP CFPGSPWPYP WNSAQWASAM  360
PPPGFCHSGF PMSFYPAPPY WGCTVPGPWN VPCLSPSSTL SHCATRSGPN SPTLGKHSRD  420
EDIPNPSSSQ NEEPAKENSS ERCVWIPKTL RIDDPNEAAR SSIWATLGIK NEKGNCTNEG  480
GGLFKAFQSK GDEKNHVVEA SPVLQANPAA FSRSLNFRER T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-104	Dof family protein