PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP003330.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 466aa MW: 51724.8 Da PI: 7.3523

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP003330.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.1	3e-52	17	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 + pGfrFhPtdeelv +yLk+kv++++l++ e ik++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s+ PCP003330.1 17 MLPGFRFHPTDEELVGFYLKRKVQQRPLSI-ELIKQLDIYKFDPWDLPKLAASGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSega 113 579*************************.89***********8888899***********************************9777 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra kg+ktdW+mhe+rl PCP003330.1 114 csSSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 148 766667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MDERSDNIGG EKMDEVMLPG FRFHPTDEEL VGFYLKRKVQ QRPLSIELIK QLDIYKFDPW 60 DLPKLAASGE KEWYFYCPRD RKYRNSTRPN RVTGAGFWKA TGTDRPIYSS EGACSSSKCI 120 GLKKSLVFYK GRAAKGVKTD WMMHEFRLPS LTDSLPPKRS SPFMDKTIPA NDSWAICRIF 180 KKTNSSNAHQ KALSHHSWVS VLPETNTFGD HMLGSKGAHN TTHQHHEFSS ESMSILTSKT 240 DFSGNNNDIQ ISSTTSNISP LDIYLNSYKP VNPLMMGCNV KLPYQYFPIS SNFPSGSSGY 300 FSNPSFPFPS PLETSSGQSA AKCTADVPSL LLNMSSSMLG DYNGSNNVKG ASAESTNFDF 360 STTNGGFSSM ALPHHHEVMQ GSNNNLGNVY DNIAGLIKNI QNVNSNVTEE RDDQQWETSA 420 RSNIGFPLMS SLPLPVDVGG GDAWKSSLTW ESSPCPTEMS TTRCYT

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MDERSDNIGG EKMDEVMLPG FRFHPTDEEL VGFYLKRKVQ QRPLSIELIK QLDIYKFDPW  60
DLPKLAASGE KEWYFYCPRD RKYRNSTRPN RVTGAGFWKA TGTDRPIYSS EGACSSSKCI  120
GLKKSLVFYK GRAAKGVKTD WMMHEFRLPS LTDSLPPKRS SPFMDKTIPA NDSWAICRIF  180
KKTNSSNAHQ KALSHHSWVS VLPETNTFGD HMLGSKGAHN TTHQHHEFSS ESMSILTSKT  240
DFSGNNNDIQ ISSTTSNISP LDIYLNSYKP VNPLMMGCNV KLPYQYFPIS SNFPSGSSGY  300
FSNPSFPFPS PLETSSGQSA AKCTADVPSL LLNMSSSMLG DYNGSNNVKG ASAESTNFDF  360
STTNGGFSSM ALPHHHEVMQ GSNNNLGNVY DNIAGLIKNI QNVNSNVTEE RDDQQWETSA  420
RSNIGFPLMS SLPLPVDVGG GDAWKSSLTW ESSPCPTEMS TTRCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-102	NAC family protein