PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP003314.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 289aa MW: 32912.7 Da PI: 6.4373 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.9 | 3.5e-18 | 81 | 134 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k PCP003314.1 81 KKRRLSMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 134 45689************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 132.9 | 1.1e-42 | 80 | 172 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr++da+k++n++L++++++L++e+++ PCP003314.1 80 EKKRRLSMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDALQSQNQKLQAEIMA 172 69**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MTTNGMAFFS TNFMLQTPHG HDDYQPPTSL NPMLPSCTPQ DFHGVASFLG KRSVSFSGIE 60 LGEDAHGEDD LSDDGSQVGE KKRRLSMEQV KTLEKNFELG NKLEPERKMQ LARALGLQPR 120 QIAIWFQNRR ARWKTKQLEK DYDLLKRQFD AIKADNDALQ SQNQKLQAEI MALKNREPAE 180 SINLNKDTEG SCSNRSENNS DIKLDISRTP AIDSPPSSHH HHHHQNPTLF SSSIIRPAQL 240 FQNTSRSEAM QCQKIDQMVK EESLTNMFCG IDDQSAAGFW PWLEQHQFN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 137 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 1e-119 | HD-ZIP family protein |