PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP002825.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 330aa    MW: 36142.7 Da    PI: 8.8885
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP002825.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.8e-17198245152
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkk 52 
                  + y+GVr++  +g+WvAeIr p   + r  r +lg+f ta eAa a+++a+++
  PCP002825.1 198 CNYRGVRQRT-WGKWVAEIRTP---N-RgSRLWLGTFPTAIEAALAYDEAARA 245
                  56*****999.**********8...3.35*********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MMASNLEFIV YEVIKVGDKA KLTILNTCDI VYIKGRGVDC ELESQTLFPW SIDHFSLPSS  60
AAPSSDTSAS ILKGGPGTKT RSRIPVVKTV SLQSKGKAAH NRRSSPDRRK ARSLVGLRLL  120
IIIFPVVQYN LNCMPKLVKI DTRRDGPNPV AETLAKWKEY NDHLDSCNDE VGPFRRVPAK  180
GSKKGCMKGK GGPENSRCNY RGVRQRTWGK WVAEIRTPNR GSRLWLGTFP TAIEAALAYD  240
EAARAVYCSA ARLNFPNISI STLSKDSSST KTLSSLPLLA SSAGSESSAR SDHSGDCADQ  300
DEDQVNGLSS NVENDDTTNV DRTNEDRDDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.23e-30ERF family protein