PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002444.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 544aa MW: 60401.1 Da PI: 4.3502

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002444.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.1	5.2e-47	4	131	2	129
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 +pGfrF+Ptd el++++Lk+k+ gk+l++ +vi+evd+yk++PwdLp k ++++ +wyfF++r+kkya+g+r +rat gyWk+tgkd++vl+ +g PCP002444.1 4 APGFRFKPTDVELLKYFLKRKLIGKRLHV-KVISEVDVYKHDPWDLPdKsGWDSGDLKWYFFCPREKKYARGNRIQRATVGGYWKTTGKDRSVLC-SG 99 59*************************.99**********95335556777**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 ++vg ktL+f++grap+g +tdWvmheyrle PCP002444.1 100 AVVGWIKTLIFHTGRAPQGDRTDWVMHEYRLE 131 9***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 544 aa Download sequence
MFKAPGFRFK PTDVELLKYF LKRKLIGKRL HVKVISEVDV YKHDPWDLPD KSGWDSGDLK 60 WYFFCPREKK YARGNRIQRA TVGGYWKTTG KDRSVLCSGA VVGWIKTLIF HTGRAPQGDR 120 TDWVMHEYRL EDQGLADRGV PLDSYVLCMI FQKEGLGPRN GAQYGKPFNE EDWSDDEVAE 180 GSQDANTPGP YLGLPCSENS PIATNTHSLE DIGIGPPSGS CISDILPQSC KVLQPVSSNY 240 VTMEKSHASH GDDIPPTFDY SREENTFFMS ENGKSMAEIH SEAVPNESMP EPNHVLPSNY 300 NGFACTSAFF SERIGIGPSE SLMSDIEPPH YNVLQLETGN YVTTEKAHMS DGDILSMFDY 360 FTEEGTLYMY GNDKIETGGC LETVLKANIP EPGQMLASNY NTFISTSTQP SEVIGVGPSF 420 QSCGLDVLPP SWEVLQPVSC NYVTMEKTPA SNGDDILPML DCFVEESAFH VNENHNNEEL 480 DNFIDFGNNA QAIPHLNTSN MYENLEVLGN SLDGCNFSGG HDDSVNHFLE LGDLDQPMNG 540 DNSV

Sequence ? help Back to Top

Protein Sequence Length: 544 aa Download sequence

MFKAPGFRFK PTDVELLKYF LKRKLIGKRL HVKVISEVDV YKHDPWDLPD KSGWDSGDLK  60
WYFFCPREKK YARGNRIQRA TVGGYWKTTG KDRSVLCSGA VVGWIKTLIF HTGRAPQGDR  120
TDWVMHEYRL EDQGLADRGV PLDSYVLCMI FQKEGLGPRN GAQYGKPFNE EDWSDDEVAE  180
GSQDANTPGP YLGLPCSENS PIATNTHSLE DIGIGPPSGS CISDILPQSC KVLQPVSSNY  240
VTMEKSHASH GDDIPPTFDY SREENTFFMS ENGKSMAEIH SEAVPNESMP EPNHVLPSNY  300
NGFACTSAFF SERIGIGPSE SLMSDIEPPH YNVLQLETGN YVTTEKAHMS DGDILSMFDY  360
FTEEGTLYMY GNDKIETGGC LETVLKANIP EPGQMLASNY NTFISTSTQP SEVIGVGPSF  420
QSCGLDVLPP SWEVLQPVSC NYVTMEKTPA SNGDDILPML DCFVEESAFH VNENHNNEEL  480
DNFIDFGNNA QAIPHLNTSN MYENLEVLGN SLDGCNFSGG HDDSVNHFLE LGDLDQPMNG  540
DNSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	3e-89	NAC family protein