PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002299.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NF-YB

Protein Properties

Length: 1077aa MW: 121132 Da PI: 5.8282

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002299.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	175.1	7.3e-55	894	989	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrkting+d++wa++tlGfedyv+plk yl++yr+legek PCP002299.1 894 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGEDIIWAITTLGFEDYVHPLKSYLHRYRDLEGEK 989 89*******************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 1077 aa Download sequence
MATGGKYTRV DNRRPSSGSG CCSTVTVVVF VALCLVGVWM MTSSSVVPIQ NVDVPTEENK 60 SEHKEQGSNN VGVKEQASDT NARQFEDNPG DLPDDATKGD SSDGAAQGGD KLQGKSEEKT 120 EEKFVEKTQE TPEEKTQDKI EEKSEEKIEE KSEDGDSKVE NGELNSENGE KKSDGGEKDK 180 SDSDDNEKKS DDGSDKKLDK SEETNDTVKV NGETEEKVEV TDTKESNGEK KENEQAKNQS 240 SNEVFPSVAQ SELLNETTTQ NSSWSTQSAE SKNEKEAQRA SDQKISYNWK VCNSTAGPDF 300 IPCLDNLQAI KSLRSTKHYE HRERHCPEEA PTCLVPLPEG YRRPIEWPTS REKVWYYNVP 360 HTKLVQIKGH QNWVKVTGEY LTFPGGGTQF KHGALHYIDF IQQSVPDIAW GKRSRVILDV 420 GCGVASFGGF LFDRDVLAMS LAPKDEHEAQ VQFALERGIP AISAVMGTKR LPFPGQVFDV 480 VHCARCRVPW HIEGGKLLLE LNRVLRPGGF FVWSATPVYK KLGEDVEIWN AMKELTKSIC 540 WELVSISKDT VNGVGIAIYK KPTSNECYEK RSQNEPPICT KSDDPNAAWN VPLQACIHEV 600 PVNATKRGSE WPEQWPARLG KAPYWLLSSQ VGVYGKPAPE DFTSDNEHWK RVVTKSYLNG 660 MGINWKSVRN VMDMRAVYGG FAAALKDLKI WVMNVVSVDS PDTLPIIYER GLFGMYHDWC 720 ESFNTYPRSY DLLHADHLFS KLKKRCNLVA VVAEVDRILR PEGKLIVRDD VETIYELENM 780 ARSMQWEVSL TYSKDKEGLL CVQKSMWRPE ESESLNPFKN QNPPKALSLS LSLSHRSINN 840 MQRETDDERL YVPSGGGGSP ETPCSLKSST TATAGASASN NNNNNHHHHN HHNKEQDRFL 900 PIANVGRIMK KVIPGNGKIS KDAKETVQEC VSEFISFVTG EASDKCQREK RKTINGEDII 960 WAITTLGFED YVHPLKSYLH RYRDLEGEKL NVPKQQRSEQ RLHQQQQQPD QQDHHNQTLL 1020 PYDNNSSSSV YSSTTNVMSQ PSFMVDHHQA FSLPFSPSSI QKQFQPQQDQ IDSVGHW

Sequence ? help Back to Top

Protein Sequence Length: 1077 aa Download sequence

MATGGKYTRV DNRRPSSGSG CCSTVTVVVF VALCLVGVWM MTSSSVVPIQ NVDVPTEENK  60
SEHKEQGSNN VGVKEQASDT NARQFEDNPG DLPDDATKGD SSDGAAQGGD KLQGKSEEKT  120
EEKFVEKTQE TPEEKTQDKI EEKSEEKIEE KSEDGDSKVE NGELNSENGE KKSDGGEKDK  180
SDSDDNEKKS DDGSDKKLDK SEETNDTVKV NGETEEKVEV TDTKESNGEK KENEQAKNQS  240
SNEVFPSVAQ SELLNETTTQ NSSWSTQSAE SKNEKEAQRA SDQKISYNWK VCNSTAGPDF  300
IPCLDNLQAI KSLRSTKHYE HRERHCPEEA PTCLVPLPEG YRRPIEWPTS REKVWYYNVP  360
HTKLVQIKGH QNWVKVTGEY LTFPGGGTQF KHGALHYIDF IQQSVPDIAW GKRSRVILDV  420
GCGVASFGGF LFDRDVLAMS LAPKDEHEAQ VQFALERGIP AISAVMGTKR LPFPGQVFDV  480
VHCARCRVPW HIEGGKLLLE LNRVLRPGGF FVWSATPVYK KLGEDVEIWN AMKELTKSIC  540
WELVSISKDT VNGVGIAIYK KPTSNECYEK RSQNEPPICT KSDDPNAAWN VPLQACIHEV  600
PVNATKRGSE WPEQWPARLG KAPYWLLSSQ VGVYGKPAPE DFTSDNEHWK RVVTKSYLNG  660
MGINWKSVRN VMDMRAVYGG FAAALKDLKI WVMNVVSVDS PDTLPIIYER GLFGMYHDWC  720
ESFNTYPRSY DLLHADHLFS KLKKRCNLVA VVAEVDRILR PEGKLIVRDD VETIYELENM  780
ARSMQWEVSL TYSKDKEGLL CVQKSMWRPE ESESLNPFKN QNPPKALSLS LSLSHRSINN  840
MQRETDDERL YVPSGGGGSP ETPCSLKSST TATAGASASN NNNNNHHHHN HHNKEQDRFL  900
PIANVGRIMK KVIPGNGKIS KDAKETVQEC VSEFISFVTG EASDKCQREK RKTINGEDII  960
WAITTLGFED YVHPLKSYLH RYRDLEGEKL NVPKQQRSEQ RLHQQQQQPD QQDHHNQTLL  1020
PYDNNSSSSV YSSTTNVMSQ PSFMVDHHQA FSLPFSPSSI QKQFQPQQDQ IDSVGHW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G13570.1	5e-57	NF-YB family protein