PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002203.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

STAT

Protein Properties

Length: 737aa MW: 82058.5 Da PI: 5.4571

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002203.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	178.8	7.6e-56	238	359	1	122
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveksddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipklkkypfl 98 ldvvll+a+++p ++++ev+asL+yad+g++vek++d eapLL+s dG ef+ +drp+k l+G+asfklkisqLsskcdnr+fr++f ipkl+kypfl PCP002203.1 238 LDVVLLDAFSHPSNQELEVIASLVYADNGEPVEKTSDGEAPLLASHDGFEFAFSDRPSKTLKGHASFKLKISQLSSKCDNRMFRVMFYIPKLEKYPFL 335 8*********************************************************************************************** PP STAT 99 eavskpirCisrsrntrsssltkk 122 +a++ pirCisrsr+tr s++++k PCP002203.1 336 KAFTPPIRCISRSRTTRISTTAWK 359 ****************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 737 aa Download sequence
MVDEAKEREE YSLLKDFRAE IEPKDGAFSL CFWLYLTSSA ASPATLIQGQ SGATRSAPFL 60 VLSEKKKMVL LPLGILHKEA PETCDLSSLS EDSYVSTENE FPTEKWIHVG CEVLSDTLRL 120 HIDGEAVGNK SMSSLFNKDS IASGLTKIIL VSGGGEDNSL QGYICNHKVL PLTSSILEYY 180 AKDPPLKLSI DNSSASEIEV DSDGVWSIVG GKVSSSFPQI DNSSASEIEA SCRRIFSLDV 240 VLLDAFSHPS NQELEVIASL VYADNGEPVE KTSDGEAPLL ASHDGFEFAF SDRPSKTLKG 300 HASFKLKISQ LSSKCDNRMF RVMFYIPKLE KYPFLKAFTP PIRCISRSRT TRISTTAWKR 360 PASASDPVSL SQLSGLGDET LELQHSSVNE EKPSPSSKRC RLGQDRIRAT VSALEQPDDE 420 CNSHARTAKQ VEALAKNVVG RPNSVEEIDD SRTDSERPEV RNPDLMSTSS SRNPISDATI 480 FKYCLASLSE KTLLLKEIAS TASNEEILSF SHQVSLYSGC SHHRHQVEMA KRLVEEGTKA 540 WNSISQNNSQ VPWESAVFEI EEQFMKIACC NSRSLTQQDF ELLRRIAGCQ EHLAKENFEK 600 LWCWLYPVAF TLSRDGINTM WSSTSPKWIE GFITKEESET SLQGSRGFQE PGTFVLRFPT 660 SRSWPHPDAG SLVVTYVGSK HTIHHRLISL DHMFSPAERE KNAKPLQDML LAEPELSQLG 720 RQEICSIYFT VHCITIY

Sequence ? help Back to Top

Protein Sequence Length: 737 aa Download sequence

MVDEAKEREE YSLLKDFRAE IEPKDGAFSL CFWLYLTSSA ASPATLIQGQ SGATRSAPFL  60
VLSEKKKMVL LPLGILHKEA PETCDLSSLS EDSYVSTENE FPTEKWIHVG CEVLSDTLRL  120
HIDGEAVGNK SMSSLFNKDS IASGLTKIIL VSGGGEDNSL QGYICNHKVL PLTSSILEYY  180
AKDPPLKLSI DNSSASEIEV DSDGVWSIVG GKVSSSFPQI DNSSASEIEA SCRRIFSLDV  240
VLLDAFSHPS NQELEVIASL VYADNGEPVE KTSDGEAPLL ASHDGFEFAF SDRPSKTLKG  300
HASFKLKISQ LSSKCDNRMF RVMFYIPKLE KYPFLKAFTP PIRCISRSRT TRISTTAWKR  360
PASASDPVSL SQLSGLGDET LELQHSSVNE EKPSPSSKRC RLGQDRIRAT VSALEQPDDE  420
CNSHARTAKQ VEALAKNVVG RPNSVEEIDD SRTDSERPEV RNPDLMSTSS SRNPISDATI  480
FKYCLASLSE KTLLLKEIAS TASNEEILSF SHQVSLYSGC SHHRHQVEMA KRLVEEGTKA  540
WNSISQNNSQ VPWESAVFEI EEQFMKIACC NSRSLTQQDF ELLRRIAGCQ EHLAKENFEK  600
LWCWLYPVAF TLSRDGINTM WSSTSPKWIE GFITKEESET SLQGSRGFQE PGTFVLRFPT  660
SRSWPHPDAG SLVVTYVGSK HTIHHRLISL DHMFSPAERE KNAKPLQDML LAEPELSQLG  720
RQEICSIYFT VHCITIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	0.0	STAT family protein