PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP002184.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 402aa MW: 45796.3 Da PI: 7.7009

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP002184.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.8	2.3e-45	91	217	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ppG+rF+P d elvv+yL kkv +++l+ + i ev++y+++P+ L k k +ekewyfF++rd+ky++g+r++ra+ +gyWkatg dk v+s++g+ PCP002184.1 91 PPGYRFNPFDGELVVHYLMKKVLDQPLPP-NRIFEVNLYRHNPEVLAeKYEKYGEKEWYFFTPRDRKYRNGSRPKRAAGDGYWKATGADKGVKSSDGA 187 9***********************999.77**********9344455899************************************** PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +vg +k Lvfy+g+ pkg kt+W+mhe+r+ PCP002184.1 188 VVGWRKALVFYRGKPPKGDKTNWIMHEFRV 217 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MVPVGQSHPH HKASVATITQ QVASYSLSPK KHSPAQGDQG QFTPAKESGA SLTTNVSAAA 60 DGADHDLSED EANSFNNNLK KDQDEFFNSF PPGYRFNPFD GELVVHYLMK KVLDQPLPPN 120 RIFEVNLYRH NPEVLAEKYE KYGEKEWYFF TPRDRKYRNG SRPKRAAGDG YWKATGADKG 180 VKSSDGAVVG WRKALVFYRG KPPKGDKTNW IMHEFRVKDS PVRRRRSEND MRVQFTRKTK 240 NGKRCDSRNH AEMISPFSHR MNDEIMETEM RGDIVDPLPE YDPALEYDHK YSNKAYSHMA 300 FLPNICGRIP VNMICNNQIQ SVDAASMNAS CYANMEHSQP LCVRPPSMSS ESVLGPYRYI 360 DESIILPDDM MFDMKGFGHS LYSTNNYAAQ FSSLDHVFPY TE

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MVPVGQSHPH HKASVATITQ QVASYSLSPK KHSPAQGDQG QFTPAKESGA SLTTNVSAAA  60
DGADHDLSED EANSFNNNLK KDQDEFFNSF PPGYRFNPFD GELVVHYLMK KVLDQPLPPN  120
RIFEVNLYRH NPEVLAEKYE KYGEKEWYFF TPRDRKYRNG SRPKRAAGDG YWKATGADKG  180
VKSSDGAVVG WRKALVFYRG KPPKGDKTNW IMHEFRVKDS PVRRRRSEND MRVQFTRKTK  240
NGKRCDSRNH AEMISPFSHR MNDEIMETEM RGDIVDPLPE YDPALEYDHK YSNKAYSHMA  300
FLPNICGRIP VNMICNNQIQ SVDAASMNAS CYANMEHSQP LCVRPPSMSS ESVLGPYRYI  360
DESIILPDDM MFDMKGFGHS LYSTNNYAAQ FSSLDHVFPY TE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	6e-43	NAC family protein