PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001980.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 534aa MW: 58824.6 Da PI: 8.7495

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001980.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00031	266	283	2	19
HHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsa 19 r +h++ E+rRR++iN++ PCP001980.1 266 RSKHSATEQRRRSKINDR 283 889*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MELPQPRPFG TEGRKPTHDF LSLHAHSVAQ QDPRPPAQGR YLETHDFLRP LERMGKPCIA 60 KEETSVEIST AEKQPSHAAA QPTNSVEHIL PGGIGTYSIS HISYFNQRVP KPEGSPVFTV 120 AQTSSNERNV DENSNCSSHT GSGFTLWEES AKNKGKRGKE NVVGERPLGT VRGQWTSSER 180 PAQSSSNNHR SCFSSQSSGQ KNMSFMEMMK YAAKGSTQEA ELDDEEEFVL KKETSTTTTN 240 ATTTYKSDLR VNVDVKSSDQ KANTPRSKHS ATEQRRRSKI NDRQVIEYIQ FLQERVNKYE 300 GPYQGWNHDP AKLMPWINDH KLRESYCDQS RGINVSGPAL PFAAKFDEKP TSVLPTIPGS 360 CAQNPVESDT STETTFKAVD HHPGITSKSM PFPLSMQPNF FAPVRSSAAA AAVPPIPPRL 420 PSDAENTSQH RSMLCQTRSC APDGTATRDK LKEQELTIEG GRINISSAYS QGLLNTLTQA 480 LQSSGVDLSQ ASISVKIELG KRANRRSPIP KSAIKENEIP TSTLGKKALC NCKQ

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MELPQPRPFG TEGRKPTHDF LSLHAHSVAQ QDPRPPAQGR YLETHDFLRP LERMGKPCIA  60
KEETSVEIST AEKQPSHAAA QPTNSVEHIL PGGIGTYSIS HISYFNQRVP KPEGSPVFTV  120
AQTSSNERNV DENSNCSSHT GSGFTLWEES AKNKGKRGKE NVVGERPLGT VRGQWTSSER  180
PAQSSSNNHR SCFSSQSSGQ KNMSFMEMMK YAAKGSTQEA ELDDEEEFVL KKETSTTTTN  240
ATTTYKSDLR VNVDVKSSDQ KANTPRSKHS ATEQRRRSKI NDRQVIEYIQ FLQERVNKYE  300
GPYQGWNHDP AKLMPWINDH KLRESYCDQS RGINVSGPAL PFAAKFDEKP TSVLPTIPGS  360
CAQNPVESDT STETTFKAVD HHPGITSKSM PFPLSMQPNF FAPVRSSAAA AAVPPIPPRL  420
PSDAENTSQH RSMLCQTRSC APDGTATRDK LKEQELTIEG GRINISSAYS QGLLNTLTQA  480
LQSSGVDLSQ ASISVKIELG KRANRRSPIP KSAIKENEIP TSTLGKKALC NCKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.2	1e-103	bHLH family protein