PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001904.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 465aa MW: 50969.7 Da PI: 6.1662

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001904.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103	1.8e-32	247	301	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr+rWtpeLHerF+eav++L G+ekAtPk +l++m+v+gLt++hvkSHLQkYRl PCP001904.1 247 RPRMRWTPELHERFIEAVNRLDGAEKATPKGVLKAMNVEGLTIYHVKSHLQKYRL 301 59****************************************************8 PP
2	Myb_DNA-binding	52.3	1.3e-16	249	300	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++++av++l g t+k + + m+ +g+t +++ks++qky+ PCP001904.1 249 RMRWTPELHERFIEAVNRLDGAekaTPKGVLKAMNvEGLTIYHVKSHLQKYR 300 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MSHHGIISVA QSETTKGVKP SYCNSPSPIH DFLGSESEGR SFTASDCSSP RVSPFIREES 60 CGPPTNMQGS PVQHSKSAFS RSSVFCTSLY QSSSSSPETS RQLGNLPFLP HPPTYGQSIS 120 AVDSKSPSLF SEDKSNQYDD KQSEDLMKDF LNLHGDSSHG NFHGISYGSD TLALTEQLEL 180 QFLSDQLDIA ITDNGENPGL DEIYENPQPS PKPDIGLTAC SEGCRLTTPL VDALTSHPSL 240 GPASAHRPRM RWTPELHERF IEAVNRLDGA EKATPKGVLK AMNVEGLTIY HVKSHLQKYR 300 LARYMPEKKE DKKASSSEEK KATSTINESD GRRKGSIHIT EALRMQMEVQ KQLHEQLEVQ 360 RVLQLRIEEH AKYLQKILEN QQKAGSALLS PQALSSLTIN SAQVSAQLPS STCASPPQSA 420 VSDSSSPQSL KHKATDCSDS EPQTCAKMPR LEERPDEGVV ENPQL

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MSHHGIISVA QSETTKGVKP SYCNSPSPIH DFLGSESEGR SFTASDCSSP RVSPFIREES  60
CGPPTNMQGS PVQHSKSAFS RSSVFCTSLY QSSSSSPETS RQLGNLPFLP HPPTYGQSIS  120
AVDSKSPSLF SEDKSNQYDD KQSEDLMKDF LNLHGDSSHG NFHGISYGSD TLALTEQLEL  180
QFLSDQLDIA ITDNGENPGL DEIYENPQPS PKPDIGLTAC SEGCRLTTPL VDALTSHPSL  240
GPASAHRPRM RWTPELHERF IEAVNRLDGA EKATPKGVLK AMNVEGLTIY HVKSHLQKYR  300
LARYMPEKKE DKKASSSEEK KATSTINESD GRRKGSIHIT EALRMQMEVQ KQLHEQLEVQ  360
RVLQLRIEEH AKYLQKILEN QQKAGSALLS PQALSSLTIN SAQVSAQLPS STCASPPQSA  420
VSDSSSPQSL KHKATDCSDS EPQTCAKMPR LEERPDEGVV ENPQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-119	G2-like family protein