PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP001826.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 455aa MW: 51487.3 Da PI: 4.4988 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 102.4 | 6.2e-32 | 58 | 196 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sgyWka 85 lp+G++F+Ptd+e++++ ++k+ g++ ++++ i +vd i+ ++P++Lp +vk + + +fF+++ k+y+tg+rk+r+++ + +W++ PCP001826.1 58 LPKGVKFDPTDQEIIWHLIAKSGVGDRkphpfIDEF--ILTVDddegICCSHPRKLP-SVKLDGSASHFFHRAIKAYNTGTRKRRKIHdgdgDVRWHK 152 799************888877755555576543333..433322344**********.667788999******************9883433446*** PP NAM 86 tgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 tg++k+v+ +g + g+kk++v+y + r +k++kt+Wvmh+y+l PCP001826.1 153 TGRTKPVIL-DGLQRGCKKIMVLYmsTVRGEKPVKTNWVMHQYHL 196 *********.999***********6656999999*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 455 aa Download sequence |
MAGPSWLVDK YRIATKIKSA SGRYDPDVII WQSNPTKACP KCQYTIDNSD VAQEWPGLPK 60 GVKFDPTDQE IIWHLIAKSG VGDRKPHPFI DEFILTVDDD EGICCSHPRK LPSVKLDGSA 120 SHFFHRAIKA YNTGTRKRRK IHDGDGDVRW HKTGRTKPVI LDGLQRGCKK IMVLYMSTVR 180 GEKPVKTNWV MHQYHLGVEE DEKDGEYVIS KIYYQQQEAK EADKTDQDVP ESIDAVITKV 240 DPVTPKSVTP EPPRAERKLG DFDLGLDTPA PSRDPFLQYR VEDGAEDEDE VHFEVDRALD 300 EIHPEVDCAE DDVCPESEMP DDYDQHKLEN QADEVINNTE NIAQEDPKWW DSESQNLLDS 360 QQLVEGLSLC DDLLQSQSPT RGGRENGEQA HIKPRLADYA KLGPEDLKRD LEACQNLVLD 420 PANILELDTP PDFRLSQLEF GSQESFLSWG GKVAD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25580.1 | 1e-169 | NAC family protein |