PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP001668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 77aa MW: 8654.98 Da PI: 4.9271 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 44.4 | 5.4e-14 | 29 | 76 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lp+Gf F+Pt eel+ +yL+ k++g++ +++vi+e++i+++eP dLp PCP001668.1 29 LPVGFGFRPTGEELIGYYLQMKLKGTDYVFSDVIPEINICDHEPMDLP 76 79****************************9****************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence |
MAANGIHFTR VGDKVFPVGF HWTRVGDVLP VGFGFRPTGE ELIGYYLQMK LKGTDYVFSD 60 VIPEINICDH EPMDLPV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 2e-14 | NAC family protein |