PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP001525.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 186aa MW: 20917.3 Da PI: 7.1964 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 177.4 | 1.3e-55 | 44 | 139 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPianv+rimk++lP nakisk+aket+qecvsefisfvt+easdkc++ekrkt+ngdd++walatlGf+dy+eplk yl++yrelegek PCP001525.1 44 KEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALATLGFDDYAEPLKRYLHRYRELEGEK 139 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 186 aa Download sequence |
MVDNIGNNNS SADREGFKYN FTGGSGNVSS DYHHHLHNQE GVIKEQDRLL PIANVGRIMK 60 QILPPNAKIS KEAKETMQEC VSEFISFVTG EASDKCHKEK RKTVNGDDIC WALATLGFDD 120 YAEPLKRYLH RYRELEGEKA AHQGKANSNE EKAEVSPPRT RFPTAAADMS NPPYMERGNS 180 SLSRRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G47810.1 | 4e-66 | NF-YB family protein |