PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP001281.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GRF

Protein Properties

Length: 488aa MW: 53466.6 Da PI: 8.0504

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP001281.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	74	1.7e-23	193	237	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rC+RtDGKkWRCsr+v ++ k+CErH h+ r+rsrk++e+ PCP001281.1 193 DPEPWRCKRTDGKKWRCSRDVAPDLKYCERHAHKTRNRSRKPVES 237 79****************************************986 PP
2	QLQ	45.3	2.7e-16	132	164	2	34
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqa 34 +FTaaQ ++L++Q ++yKy++ + PvPp+Ll++ PCP001281.1 132 PFTAAQREELERQTMIYKYMMDSSPVPPQLLLP 164 8******************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MGKRNGFAEK GAAAETEWLG LMMQNTQQTQ QTQQSFPRKK TMTVMHHHPH HHDPLLASAG 60 REACGVWDNS PGAGGGPLFC NTSNPVPSCP TDLYNPVGSD FVLPKSLQHH LPGSDHTLAF 120 SSSGGMVNVR LPFTAAQREE LERQTMIYKY MMDSSPVPPQ LLLPTSKNTS NVPRLFPNLV 180 KGSLELGISG SSDPEPWRCK RTDGKKWRCS RDVAPDLKYC ERHAHKTRNR SRKPVESQTL 240 NPNFLTNNNN MRSPTANFFR QSNITNRQSP YSGNMVPSAA AAAGSHVQPR SLAWFMNGEA 300 PAVGGSNQEW GQMMQFKLGL KSSSHNYTKP TNTDVDVPRQ QTESSLNLHT DYSGEIQGLQ 360 IQQTRHFIDA WSTSTSAERE EDRVFVSPNQ KVPFSSLTLS MSGGEGSNEE RENTQMGLGV 420 LGEERESVGG LKSQWMNPMS WTMGSPPGGP LAEALCLGIA GGSNGCNSGS TIWKSSSGDA 480 RQEFDLTN

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MGKRNGFAEK GAAAETEWLG LMMQNTQQTQ QTQQSFPRKK TMTVMHHHPH HHDPLLASAG  60
REACGVWDNS PGAGGGPLFC NTSNPVPSCP TDLYNPVGSD FVLPKSLQHH LPGSDHTLAF  120
SSSGGMVNVR LPFTAAQREE LERQTMIYKY MMDSSPVPPQ LLLPTSKNTS NVPRLFPNLV  180
KGSLELGISG SSDPEPWRCK RTDGKKWRCS RDVAPDLKYC ERHAHKTRNR SRKPVESQTL  240
NPNFLTNNNN MRSPTANFFR QSNITNRQSP YSGNMVPSAA AAAGSHVQPR SLAWFMNGEA  300
PAVGGSNQEW GQMMQFKLGL KSSSHNYTKP TNTDVDVPRQ QTESSLNLHT DYSGEIQGLQ  360
IQQTRHFIDA WSTSTSAERE EDRVFVSPNQ KVPFSSLTLS MSGGEGSNEE RENTQMGLGV  420
LGEERESVGG LKSQWMNPMS WTMGSPPGGP LAEALCLGIA GGSNGCNSGS TIWKSSSGDA  480
RQEFDLTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	2e-41	GRF family protein