PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP001133.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 30119.7 Da PI: 11.0425 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 47.8 | 4.7e-15 | 70 | 201 | 9 | 128 |
NAM 9 PtdeelvveyLkkkvegkk...leleevikevdiy.kvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlsk... 95 P d+el++++L +kv ++ + +++e+d++ +++Pw++ + k+ yfF+k +k +++g + r +++g+W+ + +++v+++ PCP001133.1 70 PADQELINFFLYRKVVLRQplvPRHVGFVHEIDLLgDHQPWEIWDacgGPQPYGKQAYFFCKLKKLSKSGVHIDRrNASEGFWNGKQLSEDVFVHhdv 167 9*************88888675333356****9762689****74233223356799********99999887776999*****99999999997556 PP NAM 96 ...kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g k+ + + ++ + ++ dW ++ y l PCP001133.1 168 npnNKWIIGRKRQFKYVNEG--SEHHHDWYLETYIL 201 5544445*********9443..34589*****9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MRFCLGKGID IPPVVALQSR SIRLVRLSNK TKKKITRTRS RRNGKAIPAQ PGAWGTKYFP 60 VSFFSQLQAP ADQELINFFL YRKVVLRQPL VPRHVGFVHE IDLLGDHQPW EIWDACGGPQ 120 PYGKQAYFFC KLKKLSKSGV HIDRRNASEG FWNGKQLSED VFVHHDVNPN NKWIIGRKRQ 180 FKYVNEGSEH HHDWYLETYI LASIPDDDQA VVAICRLRKN YHKRKRYVPQ RNRRRINGRK 240 ERHGRRINGQ LMETKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12910.1 | 7e-09 | NAC family protein |