PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP001082.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | SBP | ||||||||
Protein Properties | Length: 412aa MW: 45049.8 Da PI: 8.2495 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 132.9 | 1.1e-41 | 96 | 172 | 2 | 78 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC++dls++++yhrrhkvCe hsk+p+v+++g +qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ PCP001082.1 96 CLVDGCNSDLSTCRDYHRRHKVCELHSKTPQVTINGNKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQP 172 **************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence |
MDWNLKAASW DLSELEQETF SNLDTTVDGS SSFGDHRTFK GSSFSVDLKL GQLGGSGNND 60 LVDMLKEPVP RTTSSFSSGP SKRSRVAYSG SQMVSCLVDG CNSDLSTCRD YHRRHKVCEL 120 HSKTPQVTIN GNKQRFCQQC SRFHALEEFD EGKRSCRKRL DGHNRRRRKP QPEPLSHPGS 180 FMSSYQGTPR LLPLSSSLVY PSTNIVNPTW AGIVKTEPDS GIHNHQLPMI DKQNMFLGSS 240 DSTSSSGYKG GKQFSLFQSS DSSPVHHNHQ TSHHHSASVC RPLLNTISFS ETAGGGGSGT 300 TKSKTFCDRL TTQTHDSDCA LSLLSSPQTQ QRSEIGLRHM VQQPNSISLM QQRFGPAGLH 360 GNSSSIEPMD SVLVSKGSGD ANVHCPGMFH IGSDGSQGSG NQHPQTPPFH WQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 153 | 170 | KRSCRKRLDGHNRRRRKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 5e-65 | SBP family protein |