PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP001066.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 292aa    MW: 32659.1 Da    PI: 8.2262
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP001066.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof112.61.7e-3546105261
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                  +++ lkcprC+s+ntkfCyynny+ sqPr+fC+aC+r+WtkGG+lrnvPvGg r++++++
  PCP001066.1  46 QSEPLKCPRCESMNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGVRKNKRHK 105
                  57889*********************************************9876655554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MGLSTKQVNS NGMDWSQTSL LQVQTFQLPK PPTAVRRQQQ QNQQQQSEPL KCPRCESMNT  60
KFCYYNNYNK SQPRHFCRAC KRHWTKGGTL RNVPVGGVRK NKRHKKSSNN SPSEAAATTA  120
ANSATIEDHH EQKTTAQALY HALIGPQSSL PQQNLDNTII FSSAGLSSAT TLPFLHQSRN  180
LINFDPFSSS INTTTSSSFD TNFSSISTSL QSLNVYNYAG TEDQFKATVE EPTITSIMPN  240
ILPQQPNWKA PSTSNAATDV YSNDWNWEDI ETLVSTDLNL PHWDDSSDHM KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66940.13e-27Dof family protein