PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000995.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 794aa MW: 86409.5 Da PI: 6.1809

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000995.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.6	8.5e-52	36	163	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 l+pGfrFhPtdeelv +yLk+kv +k++++ ++i+evdiyk+ePwdL k ++k++++e+yfFs d+ky +g r nrat++gyWkatg+d++v++ + PCP000995.1 36 LAPGFRFHPTDEELVIYYLKRKVCRKPFKF-NAISEVDIYKSEPWDLAdKsSLKSRDQEYYFFSALDRKYGNGARMNRATNQGYWKATGNDRAVKH-N 131 579************************9.89**********75347888999**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +vg+kktLvf++grap+g++t+Wvmheyrl PCP000995.1 132 DINVGMKKTLVFHSGRAPDGKRTNWVMHEYRL 163 99**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 794 aa Download sequence
MGREAELQII PSAAAAVIAV AAPIDPPTPA PAPTALAPGF RFHPTDEELV IYYLKRKVCR 60 KPFKFNAISE VDIYKSEPWD LADKSSLKSR DQEYYFFSAL DRKYGNGARM NRATNQGYWK 120 ATGNDRAVKH NDINVGMKKT LVFHSGRAPD GKRTNWVMHE YRLVDEVFEK AGLGAIQDAF 180 VLCRVFHKSN IGPPNGHRYA PFVEEEWDDD DKLTLVPGQE TRTVAVVSRD AFVVGNGHAA 240 CSEQNDYAAR SEQKVHAARS EQKVHAVRSE QNDYAARSEQ KVHAARSEQN DYAAHSEQKV 300 HAARGEQNGH AAYIKGNGHA TYIGGNGHAG YIGGNGHAGY IGGNGHAAYI GGNGQAAYNG 360 ENGHGTIVER NGHGISMEGI DHGTSVKGTG HGTEGNGHGT SVKRYGHVAS VEGSGHVTFV 420 EGSGHVTSVE GNGHVTSVEG NGQGTSVKGN GHGISVKGNV VEGIGHGTII VVDDNGTTNE 480 GNCHETGTAG NGHTAPTAEN NIEQVIRNDY SDIDYSQLEL FERPGGEGEV LKHPNVNDDL 540 GSNVTKVDFV GCHDMFVNDL LAKVGDYEAF AQQFTFFIPK KDTQAISKAI VVVPELPTEN 600 QTVLPPCKTE RTDDYPMTCV VNREERLDDY PSPGPDDAQP LLTLFNRQPG QLRQYKRRRH 660 NESNSNHSNA SEISSGMTHD PCSSTTTTAS TEASMTTTTR NFLSALVEYQ LLESLEPKDT 720 TPAPPPELNA ALMESSVPTS CLKYIETLQT EIHKISIERE TLKFEMMSAQ AMINILQARI 780 DLLNKENEDL KRKV

Sequence ? help Back to Top

Protein Sequence Length: 794 aa Download sequence

MGREAELQII PSAAAAVIAV AAPIDPPTPA PAPTALAPGF RFHPTDEELV IYYLKRKVCR  60
KPFKFNAISE VDIYKSEPWD LADKSSLKSR DQEYYFFSAL DRKYGNGARM NRATNQGYWK  120
ATGNDRAVKH NDINVGMKKT LVFHSGRAPD GKRTNWVMHE YRLVDEVFEK AGLGAIQDAF  180
VLCRVFHKSN IGPPNGHRYA PFVEEEWDDD DKLTLVPGQE TRTVAVVSRD AFVVGNGHAA  240
CSEQNDYAAR SEQKVHAARS EQKVHAVRSE QNDYAARSEQ KVHAARSEQN DYAAHSEQKV  300
HAARGEQNGH AAYIKGNGHA TYIGGNGHAG YIGGNGHAGY IGGNGHAAYI GGNGQAAYNG  360
ENGHGTIVER NGHGISMEGI DHGTSVKGTG HGTEGNGHGT SVKRYGHVAS VEGSGHVTFV  420
EGSGHVTSVE GNGHVTSVEG NGQGTSVKGN GHGISVKGNV VEGIGHGTII VVDDNGTTNE  480
GNCHETGTAG NGHTAPTAEN NIEQVIRNDY SDIDYSQLEL FERPGGEGEV LKHPNVNDDL  540
GSNVTKVDFV GCHDMFVNDL LAKVGDYEAF AQQFTFFIPK KDTQAISKAI VVVPELPTEN  600
QTVLPPCKTE RTDDYPMTCV VNREERLDDY PSPGPDDAQP LLTLFNRQPG QLRQYKRRRH  660
NESNSNHSNA SEISSGMTHD PCSSTTTTAS TEASMTTTTR NFLSALVEYQ LLESLEPKDT  720
TPAPPPELNA ALMESSVPTS CLKYIETLQT EIHKISIERE TLKFEMMSAQ AMINILQARI  780
DLLNKENEDL KRKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10490.1	4e-92	NAC family protein