PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000836.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GATA
Protein Properties Length: 374aa    MW: 40917.4 Da    PI: 6.8722
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000836.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17261295135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  PCP000836.1 261 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 295
                  99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MEAPEYYQNS FCPQFAPEKR HPFDNNKTAV GSGGGDHFKV EDLLDFSNDD DAVITDGGCP  60
AAAVFENAAG NSTDSSTLTV MDSCNSSSLS GSEPLFGSRN LADGPLSSEL CVPYDDLAEL  120
EWLSNFVEES FSSEDLQRLQ LISGMKSRPD EAASETRLLQ PDPTRINNNP YSNSNPIFNP  180
EVSVPAKARS KRSRAAPCNW TSRILLLSST KEQSDVLVSA AEAATPLQQP SSTGKKTVKS  240
APKKKESQEG SGGGHGDGRK CLHCATDKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR  300
PAASPTFVLT KHSNSHRKVL ELRRQKEMGR AQQTYIHQVP PPHHHHHQNM VFDVSNGGDY  360
LIHQHVGPDF RQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.17e-84GATA family protein