PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000670.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 386aa    MW: 42554.9 Da    PI: 4.6472
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000670.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-19113162255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a +++++g
  PCP000670.1 113 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEARRIRG 162
                  69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
MCGGAIISDF IAPPARSRRL TADCLWSDLK KPSSGKRFSK PLRSVIVDLD DDFEADFQEF  60
KDESDVDEDD EMVDSKPSAF SAGKPSSARG SAVKSVEFNG QAEKSAKRKR KNQYRGIRQR  120
PWGKWAAEIR DPRKGVRVWL GTFNTAEEAA RAYDAEARRI RGKKAKVNFP EETPRASAKR  180
SVKANSQKLI PKTNVNGTES SLNQNFNFVN DSSEDYYGAL GFLDEKPTLN NFGYMSTFPA  240
NGDVALKSST PSDPAPFYLS SDQGSNSFDC SEFGWGEQGS KTPEISSVLS SVMEETDDSL  300
FLEDANQTKK LKPNSRDLVL PQDSTGKTLS DELSAFEMKY FQTPYLDGSW DASVDAFLNG  360
DATQDGGNPV DLWTFDDLPA IVGGTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.36e-90ERF family protein