PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000589.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 364aa    MW: 39511.9 Da    PI: 6.8902
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000589.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-20183232255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  PCP000589.1 183 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 232
                  59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MATTMDFYSS GAALQSSSDP FGGELMEALE PFMKSASSSP PPPSLHTTTT SPPSSAPFLP  60
SFRSTSSSSS HDFLSFSNQP SFYDDGCSTS SMTQLFSDGL FEKHHQQLPS IGLNHLTPSQ  120
IHQIQVQIQS QSHSQPQQTQ ISWENHHQQV SQPSSHTLSF LGPKPVLMKQ VGSSGSPPKP  180
TKLYRGVRQR HWGKWVAEIR LPKNRTRLWL GTFDTAEEAA LAYDKAAYKL RGDFARLNFP  240
HLRHNGSVVG GEFGEYKPLH ASVDAKLQAI CENLAEAQKQ GKAGKPAKRS SAAASRQPAP  300
ETLAVKVETS SPVMTDSEGS AGSSPLSDLT FGDSTEPWEN SGACESTAVL EKYPSEIDWA  360
SIFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.15e-67ERF family protein