PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000559.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CPP

Protein Properties

Length: 564aa MW: 59640.9 Da PI: 7.6319

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000559.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42	1.8e-13	133	172	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C +C+N+ e+ PCP000559.1 133 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCVNCCNNVEN 172 89************************.******9875 PP
2	TCR	51	2.9e-16	217	256	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e PCP000559.1 217 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 256 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MGEGDGADSA PKKTQSDAAA GAATTSSSSS MNDVPARKLA RQLDFTVFGS APASVAVPEL 60 PKPPLPTVAV PPSLPKPPVV SVPVPVSLPQ QPHTLKPGSI LVEKFGFWIV RKPESPKSRP 120 RPNVDAKDGT PKKQKQCNCK HSRCLKLYCE CFASGIYCDG CNCVNCCNNV ENESARNDAI 180 EATLERNPNA FRPKIASSPH GARDTREEAG EVLILGKHNK GCHCKKSGCL KKYCECFQAN 240 ILCSENCKCM DCKNFEGSEE RQALFHGDHG NNMAYLQQAA NAAITGAIGS SGYASSPPVS 300 KKRKGQELFG PTAKDPSLHR IGQFQQGNNI RAPAPSPLSS VPVNHLGGTT GLGPSKFTYR 360 SLLADIIQPQ DLKELCSVLV VVAEEAANTL ADQRNTAGKP TETSLASTTQ DRLQNEKESD 420 AQNAVADDRS SLNEADKISP EDSNSDGADV TKGRPMSPGT LALMCDEQDT MFMSAASNGL 480 MGDETKCSSL ARSEAETQKD QHSNGSTNAR IDSQTAQGPI TNGVTKPVVP LAAKTTTSQT 540 VTAAVSALSK TPSHPENGDG RPKA

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MGEGDGADSA PKKTQSDAAA GAATTSSSSS MNDVPARKLA RQLDFTVFGS APASVAVPEL  60
PKPPLPTVAV PPSLPKPPVV SVPVPVSLPQ QPHTLKPGSI LVEKFGFWIV RKPESPKSRP  120
RPNVDAKDGT PKKQKQCNCK HSRCLKLYCE CFASGIYCDG CNCVNCCNNV ENESARNDAI  180
EATLERNPNA FRPKIASSPH GARDTREEAG EVLILGKHNK GCHCKKSGCL KKYCECFQAN  240
ILCSENCKCM DCKNFEGSEE RQALFHGDHG NNMAYLQQAA NAAITGAIGS SGYASSPPVS  300
KKRKGQELFG PTAKDPSLHR IGQFQQGNNI RAPAPSPLSS VPVNHLGGTT GLGPSKFTYR  360
SLLADIIQPQ DLKELCSVLV VVAEEAANTL ADQRNTAGKP TETSLASTTQ DRLQNEKESD  420
AQNAVADDRS SLNEADKISP EDSNSDGADV TKGRPMSPGT LALMCDEQDT MFMSAASNGL  480
MGDETKCSSL ARSEAETQKD QHSNGSTNAR IDSQTAQGPI TNGVTKPVVP LAAKTTTSQT  540
VTAAVSALSK TPSHPENGDG RPKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-153	CPP family protein