PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000308.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 1472aa MW: 166337 Da PI: 5.3964

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000308.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	85	1.4e-26	442	583	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgy 82 lp+G++F+P+d el+ e+L++k+ + + ++e+i++++ iy +P++Lp + +++ ++++fF+k+ ++yatg+rk+r+ +++ + PCP000308.1 442 LPVGVKFDPSDGELL-EHLAAKCGVGNsqphMFIDEFIPTLEgdngIYCDHPENLPGA-TKDGSSIHFFHKTMNAYATGQRKRRKvdnqrsvaAENIR 537 799**********.9999998766645553333345544233459*****44.4567899**************76888887766889 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+k++++ + +g kk++v+y +++ +k+ek +W mh+y+l PCP000308.1 538 WHKTGKTKALIE--NGITGWKKIMVLYksSKKGSKPEKMNWAMHQYHL 583 ******99..6689*****4434667788*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1472 aa Download sequence
MFSQLLPWLE QWQQWFWPIA FIEGQAETYS NPCQHERDED PDEVEQWRKD LKASADWGGR 60 NLKTTADRYK NQNVAVKIVH RGETPEQIAK REARFAREVA MMSKVQHKNL VKFIGACKEP 120 VMVIVTELLL GGTLRKYLFS MRPRCLDTCV AVGFALDIAR AMECLHSHGI IHRDLKPENL 180 ILTADQKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRHGE KKHYNHKVDA 240 YSFAIVLWEL IHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEDLALIVT SCWKEDPNDR 300 PNFTQIIQML LHYLSTISAP APAIPQRIFK SENAVLPPES PGTSSLMATH DDSARQDSFV 360 LTAPQLRTQV SSTPYPTETK DSEPEPEACR AWLINSRGLA KKVKNASQSS ACPIKDSGAN 420 RECPNCHFVI DNSDVLSEWP GLPVGVKFDP SDGELLEHLA AKCGVGNSQP HMFIDEFIPT 480 LEGDNGIYCD HPENLPGATK DGSSIHFFHK TMNAYATGQR KRRKVDNQRS VAAENIRWHK 540 TGKTKALIEN GITGWKKIMV LYKSSKKGSK PEKMNWAMHQ YHLGAEDDEK DGEYVVSKIF 600 YQQHKQSEMN DNNVVVEDSD VNALQTSPRT PATNPPIPPR PGKSVWCDDV PDEAMLPSSS 660 KEVELVQEAY HVPQPDTRFE DNIGQPTWLA GESQVEDLDS LGETLLCKEI FGYSTDLNGS 720 APNPISNTDF NNNTYGVTGN SSTSCGIHDL ENIELDSPPD FQLATVYLIG STGYDDDERA 780 SGNDIEFPIL CNRRIHLTGL FSRILFSGNE ATSALLETHG FSRCPLQLLR AYEVPWRVAM 840 ELYIRIIQLS TTEISFQNAL LLRDVSAKVL SSNAVQPSKP SEDCYSSSSR PANPFDGWSR 900 SLSTSRGSSS MRSKVAKRMQ KESGKTLREV RRAKKLQKKL MTENERLIYN LKRAKRKVAL 960 LLQKLKKYEL PDLPTPRHDP ELLTLEQLQA LKKIGFKNKN YVPVGVRGVF GGVVQNMHLH 1020 WKFHEIVQVC CDNFPKEKIK EMATMLARLS GGIVALFKAR FEQALESQKL NIKKIEQQLR 1080 RSGVNPEDPV AIASIQRVAS SFFNAIDQKD GSPYVFQGDK PSVAEPDNKL KHPEPPDEEE 1140 EEELDKFIAE IEDAAEREWA AEEAAEKEEF TRMRYWNREE YGGRYRRSEE PENDDSDDEI 1200 PRARDWRHTH GKQRPNGDSK DDDEEWRSNN VMGASVLDSD ADDSDGMPEN FKISPRDRGR 1260 QDGIGRAKND GRLYRNSEAN NRKANNGKIM VDDGTESENV LSDLDTAMWK SDSEEEHDST 1320 ASRAANYDFR SSSDEEEDLM YVKGGKERVN DSESNTDYSN KARGKFEASR VAKGKHDRIG 1380 RGNSEYFKRN ADVSTRRKPV EEDVKSEDIS GDSENEIWEL NAASDSGASK AGRFDYNSSD 1440 EEDYQVRREE KNGNGNKSTR TRKDLDEDWD SD

Sequence ? help Back to Top

Protein Sequence Length: 1472 aa Download sequence

MFSQLLPWLE QWQQWFWPIA FIEGQAETYS NPCQHERDED PDEVEQWRKD LKASADWGGR  60
NLKTTADRYK NQNVAVKIVH RGETPEQIAK REARFAREVA MMSKVQHKNL VKFIGACKEP  120
VMVIVTELLL GGTLRKYLFS MRPRCLDTCV AVGFALDIAR AMECLHSHGI IHRDLKPENL  180
ILTADQKTVK LADFGLAREE SLTEMMTAET GTYRWMAPEL YSTVTLRHGE KKHYNHKVDA  240
YSFAIVLWEL IHNKLPFEGM SNLQAAYAAA FKNVRPSAES LPEDLALIVT SCWKEDPNDR  300
PNFTQIIQML LHYLSTISAP APAIPQRIFK SENAVLPPES PGTSSLMATH DDSARQDSFV  360
LTAPQLRTQV SSTPYPTETK DSEPEPEACR AWLINSRGLA KKVKNASQSS ACPIKDSGAN  420
RECPNCHFVI DNSDVLSEWP GLPVGVKFDP SDGELLEHLA AKCGVGNSQP HMFIDEFIPT  480
LEGDNGIYCD HPENLPGATK DGSSIHFFHK TMNAYATGQR KRRKVDNQRS VAAENIRWHK  540
TGKTKALIEN GITGWKKIMV LYKSSKKGSK PEKMNWAMHQ YHLGAEDDEK DGEYVVSKIF  600
YQQHKQSEMN DNNVVVEDSD VNALQTSPRT PATNPPIPPR PGKSVWCDDV PDEAMLPSSS  660
KEVELVQEAY HVPQPDTRFE DNIGQPTWLA GESQVEDLDS LGETLLCKEI FGYSTDLNGS  720
APNPISNTDF NNNTYGVTGN SSTSCGIHDL ENIELDSPPD FQLATVYLIG STGYDDDERA  780
SGNDIEFPIL CNRRIHLTGL FSRILFSGNE ATSALLETHG FSRCPLQLLR AYEVPWRVAM  840
ELYIRIIQLS TTEISFQNAL LLRDVSAKVL SSNAVQPSKP SEDCYSSSSR PANPFDGWSR  900
SLSTSRGSSS MRSKVAKRMQ KESGKTLREV RRAKKLQKKL MTENERLIYN LKRAKRKVAL  960
LLQKLKKYEL PDLPTPRHDP ELLTLEQLQA LKKIGFKNKN YVPVGVRGVF GGVVQNMHLH  1020
WKFHEIVQVC CDNFPKEKIK EMATMLARLS GGIVALFKAR FEQALESQKL NIKKIEQQLR  1080
RSGVNPEDPV AIASIQRVAS SFFNAIDQKD GSPYVFQGDK PSVAEPDNKL KHPEPPDEEE  1140
EEELDKFIAE IEDAAEREWA AEEAAEKEEF TRMRYWNREE YGGRYRRSEE PENDDSDDEI  1200
PRARDWRHTH GKQRPNGDSK DDDEEWRSNN VMGASVLDSD ADDSDGMPEN FKISPRDRGR  1260
QDGIGRAKND GRLYRNSEAN NRKANNGKIM VDDGTESENV LSDLDTAMWK SDSEEEHDST  1320
ASRAANYDFR SSSDEEEDLM YVKGGKERVN DSESNTDYSN KARGKFEASR VAKGKHDRIG  1380
RGNSEYFKRN ADVSTRRKPV EEDVKSEDIS GDSENEIWEL NAASDSGASK AGRFDYNSSD  1440
EEDYQVRREE KNGNGNKSTR TRKDLDEDWD SD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	2e-83	NAC family protein