PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000177.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 470aa MW: 51359.1 Da PI: 7.1463

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000177.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.1	4.8e-30	205	264	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCt a Cpv+k+v+r+ ed +++++tYeg+Hnh+ PCP000177.1 205 MNDGCQWRKYGQKTAKGNPCPRAYYRCTVApACPVRKQVQRCYEDMSILITTYEGTHNHP 264 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MLNSNGRSSS AEKKVDQSVG YQEVHSRDLR KESELDNAKA ELGEVMEENA RLKMALNHME 60 KDYHSLQLRF FDILKQQASK KAVNVAGHRI IEEPEELLSL CLGRSPREPK NDRETTAGSN 120 FTKLAQVDDG EENLKANLTL GLGSDETSLE EPNKNHAEAG GGEASSPPSS KTPKTMRNED 180 GEPPPQVNAK RARVSVRARC DAPTMNDGCQ WRKYGQKTAK GNPCPRAYYR CTVAPACPVR 240 KQVQRCYEDM SILITTYEGT HNHPLPFTAT CMASTTSAAA SMLLSGSSTS HPGFDSTATL 300 INGSEFRAFD NSRTQLYMPK SAHPLLPTIT LDLTASTSSS STFPSSLSFC SPSDSNNLPI 360 SWGNEYLRYG LLLSDKTQVG SYNLGKASQE YFHQTYAEKI HQASFQVSLT ESLTNAITSD 420 PNFKSVIAVA LSSMVGGGGD ATHRNQGEGG ERMGQQLKWG EAAHQFTSRK

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MLNSNGRSSS AEKKVDQSVG YQEVHSRDLR KESELDNAKA ELGEVMEENA RLKMALNHME  60
KDYHSLQLRF FDILKQQASK KAVNVAGHRI IEEPEELLSL CLGRSPREPK NDRETTAGSN  120
FTKLAQVDDG EENLKANLTL GLGSDETSLE EPNKNHAEAG GGEASSPPSS KTPKTMRNED  180
GEPPPQVNAK RARVSVRARC DAPTMNDGCQ WRKYGQKTAK GNPCPRAYYR CTVAPACPVR  240
KQVQRCYEDM SILITTYEGT HNHPLPFTAT CMASTTSAAA SMLLSGSSTS HPGFDSTATL  300
INGSEFRAFD NSRTQLYMPK SAHPLLPTIT LDLTASTSSS STFPSSLSFC SPSDSNNLPI  360
SWGNEYLRYG LLLSDKTQVG SYNLGKASQE YFHQTYAEKI HQASFQVSLT ESLTNAITSD  420
PNFKSVIAVA LSSMVGGGGD ATHRNQGEGG ERMGQQLKWG EAAHQFTSRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-79	WRKY family protein