PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP000169.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 91aa MW: 10345.8 Da PI: 9.3331 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 18.7 | 3.2e-06 | 21 | 57 | 18 | 54 |
HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54 + ++Lr+l+P+ + +s K + +L++++ YI++L PCP000169.1 21 ELVSKLRQLVPEiR-DRRSNKAPASKVLQETCSYIRNL 57 56689*******66.7888889999***********99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 91 aa Download sequence |
MSSRRSRQSG TPAIKDDQII ELVSKLRQLV PEIRDRRSNK APASKVLQET CSYIRNLHRE 60 VDDLSERLSQ LLSTIDADSP EAAIIRSLIM Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G28857.1 | 3e-40 | bHLH family protein |