PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000159.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 378aa MW: 42553.8 Da PI: 7.3023

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000159.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.1	6.1e-52	15	141	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 pGfrFhPtdeelv +yLk+k++++ l++ e ik+vdiyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ +++ PCP000159.1 15 LPGFRFHPTDEELVGFYLKRKIQQRLLPI-ELIKQVDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGTK 111 69*************************.89***********9888999***********************************95666 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lvfy+gra kg ktdW+mhe+rl PCP000159.1 112 CIGLKKSLVFYRGRAAKGIKTDWMMHEFRL 141 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MEEKNEMERV DDVILPGFRF HPTDEELVGF YLKRKIQQRL LPIELIKQVD IYKYDPWDLP 60 KLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV 120 FYRGRAAKGI KTDWMMHEFR LPSLSDSAPP KKFLDKSLPA NDSWAICRIF KKTNSMAQRA 180 LSHSWASQFP EPTASNLFTQ QFSSENMSCT TDMGSTVQFW NNNDLQQPSN TNFSAFDTLP 240 YKPINPTVSK PSMFEGEFPN GFMFSPVEMS GPMSPALIGD LSNPAGSIDF DGSQQQFTGF 300 SIGLQQQDQL QGNIGTSENE GGFRKNVSSS STSQWGTSTI RSIGFPFSLA SEDEAWKPTL 360 PSDSPPCPSS FSTNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MEEKNEMERV DDVILPGFRF HPTDEELVGF YLKRKIQQRL LPIELIKQVD IYKYDPWDLP  60
KLASTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV  120
FYRGRAAKGI KTDWMMHEFR LPSLSDSAPP KKFLDKSLPA NDSWAICRIF KKTNSMAQRA  180
LSHSWASQFP EPTASNLFTQ QFSSENMSCT TDMGSTVQFW NNNDLQQPSN TNFSAFDTLP  240
YKPINPTVSK PSMFEGEFPN GFMFSPVEMS GPMSPALIGD LSNPAGSIDF DGSQQQFTGF  300
SIGLQQQDQL QGNIGTSENE GGFRKNVSSS STSQWGTSTI RSIGFPFSLA SEDEAWKPTL  360
PSDSPPCPSS FSTNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-106	NAC family protein