PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP000155.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 351aa    MW: 38144.7 Da    PI: 7.3025
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP000155.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer108.83.1e-3463120359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v+YkeClkNhAa+lGgha+DGCgEfmps+ ++ +++++lkCaACgCHRnFHRr++e+
  PCP000155.1  63 VVTYKECLKNHAATLGGHALDGCGEFMPSPAADpADPTSLKCAACGCHRNFHRRDPED 120
                  589******************************9********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MDITPSITTT TNNTASTKSP EADSETPTRI RQPLKPPSSN GVLKRHNPTH HLHHHNIPIT  60
PVVVTYKECL KNHAATLGGH ALDGCGEFMP SPAADPADPT SLKCAACGCH RNFHRRDPED  120
PVQPNTPAAT THVIEYQPHH RHHPPPPTHP GNRSPSSASP PPISSSYYPS APHMLLALST  180
AHENALAGAN NNNAVAIPQI VSPSPNARKR FRTKFTQDQK EKMYQFAERV GWKMQKKDEE  240
IVQEFCNEAG IEKGVLKVWM HNNKNTFSKR DVLNGGAGGR AGSLSRPSFL LEHSHHHNNG  300
TNGNGNGNGN NNDDDEEEDD DQNDNKNGFP NPNHHYQGAD GGGNNGSSSS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.14e-66ZF-HD family protein