PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP000144.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 511aa MW: 55260.1 Da PI: 5.8901

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP000144.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	1e-39	148	208	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s PCP000144.1 148 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 208 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MSEAAKDPAI KLFGKTIPVL SSDGDSVGVP GGPEPYPSSG TVAEETVDQD RAASSSNSSP 60 EVNTQREREE KEVNDNKDTL GEKPIQAKQE NGITTLSSEE LTNPDAASII GVNPESPVEK 120 ENATLKTEKT EEEQSETSNA QDKTLKKPDK ILPCPRCNSM DTKFCYYNNY NVNQPRHFCK 180 NCQRYWTAGG TMRNVPVGAG RRKNKNSASH YRHITVSEAV PNAQADVLNG VHHRSVKPNG 240 TVLTFCGDMP LCESMASVLH LADKNIQNCT RNGFQKPGGL RIPASYGGGV NGDDHLTGST 300 VTDSNSKDEA CKSGSQEQVL QNYQGFPPQV PCFPGAPWPY PWNSSQWSSP VTPPAFCPPG 360 YPMPFYPAAA YWGCAVQGPW NIPWLPPPSS LNNSAPSSGP NSPTLGKHSR EENTMKQNSS 420 EEEEPPKEKS AEKNLWIPKT LRIDDPGEAA KSSIWATLGI KNDKADSVSS GGLFKAFQSK 480 GDQKNHPSDA SPVLQANPAA LSRSLNFQES S

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MSEAAKDPAI KLFGKTIPVL SSDGDSVGVP GGPEPYPSSG TVAEETVDQD RAASSSNSSP  60
EVNTQREREE KEVNDNKDTL GEKPIQAKQE NGITTLSSEE LTNPDAASII GVNPESPVEK  120
ENATLKTEKT EEEQSETSNA QDKTLKKPDK ILPCPRCNSM DTKFCYYNNY NVNQPRHFCK  180
NCQRYWTAGG TMRNVPVGAG RRKNKNSASH YRHITVSEAV PNAQADVLNG VHHRSVKPNG  240
TVLTFCGDMP LCESMASVLH LADKNIQNCT RNGFQKPGGL RIPASYGGGV NGDDHLTGST  300
VTDSNSKDEA CKSGSQEQVL QNYQGFPPQV PCFPGAPWPY PWNSSQWSSP VTPPAFCPPG  360
YPMPFYPAAA YWGCAVQGPW NIPWLPPPSS LNNSAPSSGP NSPTLGKHSR EENTMKQNSS  420
EEEEPPKEKS AEKNLWIPKT LRIDDPGEAA KSSIWATLGI KNDKADSVSS GGLFKAFQSK  480
GDQKNHPSDA SPVLQANPAA LSRSLNFQES S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-89	Dof family protein