PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0012272.1_g010.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 163aa MW: 19299.1 Da PI: 9.922 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 124.6 | 8.1e-39 | 17 | 137 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgy 82 lp+GfrF+Ptdeelv++yLk+k+eg++ e +i+e+di+k+ePwdLp k +k+++++w+fF k +k +ratk+g+ Pav_sc0012272.1_g010.1.br 17 LPVGFRFRPTDEELVNYYLKNKLEGSHAEN--IIDEIDILKFEPWDLPdKsLIKSDDENWFFFYKYKK-------GSRATKEGF 91 79***********************99555..8**************964477888899999987644.......579999*** PP NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 Wk t kd+ ++++ +++++ k++L+fy gr +k++kt+Wv+hey Pav_sc0012272.1_g010.1.br 92 WKITSKDRVIKARdNRTVIAKKRILTFYIGRVRKSTKTNWVIHEYY 137 ***********995566688899**********************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MARLSRAAEE EEGDLSLPVG FRFRPTDEEL VNYYLKNKLE GSHAENIIDE IDILKFEPWD 60 LPDKSLIKSD DENWFFFYKY KKGSRATKEG FWKITSKDRV IKARDNRTVI AKKRILTFYI 120 GRVRKSTKTN WVIHEYYIPD DAHPNAKQLK GVPNLKSMRW NVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 3e-42 | NAC family protein |