PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0010000.1_g010.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 365aa    MW: 41772 Da    PI: 4.2907
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0010000.1_g010.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.33e-2327457128
                        NAM  57 ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                ew+fFs+rd ky +++r+nrat +g Wk tgk++ + ++ +++++g k+t++fy+   pk++kt+Wvmhey+l
  Pav_sc0010000.1_g010.1.br   2 EWFFFSRRDYKYINSNRSNRATPHGSWKITGKERMIRARgSNAVIGRKRTMTFYERCVPKSKKTNWVMHEYSL 74 
                                8*************************************9666779**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MEWFFFSRRD YKYINSNRSN RATPHGSWKI TGKERMIRAR GSNAVIGRKR TMTFYERCVP  60
KSKKTNWVMH EYSLFESEAS PDPQLAEGLQ LMQRDFVVCR LKKNPDKKDT LVFAEGEPSS  120
YNLCNCEDQA AADVTPESQD HSPSTLQSPA WIELGDVLQA NGLNEDCNDM QSPFGDNDYS  180
VTDKNDISTC DEGEPHGFTV TNIENEVAYD MSQELYAQQE KNSYMLTPQS PTFRNLEDFM  240
YIDASDFGNQ TANNMVLEQA QDYHSFTLPS PIYSELGSVV PHVDVYNNEW QSTYANFENQ  300
TTNERISEEC PQPKENLRSI LSASQLADYT SQLLMNTEEC QMRPCEIGIE GAAGMNWEDS  360
FFHFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.32e-23NAC family protein