PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0009560.1_g020.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 394aa    MW: 44379.7 Da    PI: 9.4044
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0009560.1_g020.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.83.8e-1816522652110
                        NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy....k 110
                                k +e ewyfF++rd+ky++g+r++ra+ +gyWkatg dk+v s +g+lvg +k L f      
  Pav_sc0009560.1_g020.1.br 165 KYGEAEWYFFTPRDRKYKNGSRPKRAAGDGYWKATGADKAVRS-NGALVGFRKALEFRvkdsP 226
                                34678*************************************9.99***********944441 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MVYKKRFVIC HIPDRLRCST ILSALSPPSL ALTVLFLGAH YQLPSGSPIL GLLWPPTRLL  60
RSSYDSEARP DVLVDTLAPH GRVALIPNCH IPDWLRRSTI LSALSPPLSG PHGFVSGSPL  120
PTSQWVTHPG IALAPNSLNF GVPTTPKPVS SQKASCYMDA NKNRKYGEAE WYFFTPRDRK  180
YKNGSRPKRA AGDGYWKATG ADKAVRSNGA LVGFRKALEF RVKDSPVRRK NGENDMRLDN  240
WVLCRIYKKV DKNSKRCETR NHVEDSLSPQ PQIINGEGME MEMEMSTLFD PVVEYDNKYS  300
IMQNVYGVSH NGMVHSQLQA VPMNEVPSYL NIGHPQAISA RASSMPLLLD SLLESRYIDE  360
STIHPNDLYN LKAFERSLYD TYQRQFPPVE NFYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-27NAC family protein