PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0008925.1_g010.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 453aa MW: 52623.4 Da PI: 6.7306

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0008925.1_g010.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.7	1e-09	42	94	35	88
FAR1 35 CskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 + +gkre++k + + +++raetr gC a++k++ + ++k++vt+++ eH+H Pav_sc0008925.1_g010.1.br 42 ETTQGKREKNKCD-GSVKSHRAETRFGCLARMKISCRLNDKYCVTEFVPEHTHV 94 5679999999999.99999**********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MNGENNYRDD DGTQASPKLI FETGVDFNAF ADSESNEEKL SETTQGKREK NKCDGSVKSH 60 RAETRFGCLA RMKISCRLND KYCVTEFVPE HTHVTSSPCK THFFRSHRNM SLAQIVEADM 120 ADSSGIAPKT TLELLSRQAG GRQNLGFILV DYKNYLRSKR TREMRVGDTG GLLEYLQQMQ 180 LSDPNFFYAI QVDEDDMITN IFWADARMMV DYDYFGDVVC FDTTYRKNKD GRPFAMFVGV 240 NNHRQTVVFG AALLYAETAE TFIWLFDTFV KAMSGKKPIS ILTDQDAAMA KALLSEWPET 300 CHRLCIWHIY QNAAKHLSNA FEKFKNLTKD FGRCIYDYED EDDFINAWNN MLEKYNLKDN 360 DWLRRLFNIK EQWALVYGRQ TFCADITTTQ RSESMNSALK KYVSYKYDLL RFFQHFQRLV 420 EDRRYQELKA EFRASQSSPA LSFPVEILKH ASN

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MNGENNYRDD DGTQASPKLI FETGVDFNAF ADSESNEEKL SETTQGKREK NKCDGSVKSH  60
RAETRFGCLA RMKISCRLND KYCVTEFVPE HTHVTSSPCK THFFRSHRNM SLAQIVEADM  120
ADSSGIAPKT TLELLSRQAG GRQNLGFILV DYKNYLRSKR TREMRVGDTG GLLEYLQQMQ  180
LSDPNFFYAI QVDEDDMITN IFWADARMMV DYDYFGDVVC FDTTYRKNKD GRPFAMFVGV  240
NNHRQTVVFG AALLYAETAE TFIWLFDTFV KAMSGKKPIS ILTDQDAAMA KALLSEWPET  300
CHRLCIWHIY QNAAKHLSNA FEKFKNLTKD FGRCIYDYED EDDFINAWNN MLEKYNLKDN  360
DWLRRLFNIK EQWALVYGRQ TFCADITTTQ RSESMNSALK KYVSYKYDLL RFFQHFQRLV  420
EDRRYQELKA EFRASQSSPA LSFPVEILKH ASN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-105	FAR1 family protein