PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0007387.1_g010.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 442aa MW: 49250.1 Da PI: 4.506

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0007387.1_g010.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	92.1	9.3e-29	7	138	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk 79 p+Gf+F+P+deel+ +yL +kv+g++++ e+vi+e+d+y ++ePwd+ + k ++ +++yfF+k ++++a+++r r++ Pav_sc0007387.1_g010.1.br 7 PMGFKFRPSDEELLGYYLPNKVRGSSFKYENVIPEFDLYgQIEPWDIWNqfggnK-LEDGEDLYFFTKLKSSSAKNTRMARTIG 89 89*************************99**99457*74244422.2356689***************** PP NAM 80 sgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 sg Wka + k+v + k+++ g+ k L + + ++ ++ W+mhey+l Pav_sc0007387.1_g010.1.br 90 SGSWKAENSGKKVPDPkdKKNDLGMWKRLHYE--NPKSDQNGCWIMHEYSL 138 *********998667777***997..45555799*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MAPNNIPMGF KFRPSDEELL GYYLPNKVRG SSFKYENVIP EFDLYGQIEP WDIWNQFGGN 60 KLEDGEDLYF FTKLKSSSAK NTRMARTIGS GSWKAENSGK KVPDPKDKKN DLGMWKRLHY 120 ENPKSDQNGC WIMHEYSLRP SLVKPKPNST HQFVVCRIRK NHSRKRKFKS TAANGIPSLQ 180 SQNKKQRQQE TSFDEYLIGS STPMSQAIGG GPTQSQSQQD CPFAYPITMV DDAIQFHGDF 240 LMGGFSPSVD SAQSFTEQAE FGSYNQERME CIEFDEPHAT QLGLTDNNIG AAATEESGCQ 300 FGSENSQPDN VDFSIDYGWL HHLIQVDDDD VTTATPSGSQ SIHQSAVDDE ERPASGLSSQ 360 SLTTESALEF GMSSSENHTG AQLGVGTESA QVNASEFQVH NEDMLDFLNT ASFDQLVDMF 420 QFHDDDEVQA FTTQSSVMGI IG

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MAPNNIPMGF KFRPSDEELL GYYLPNKVRG SSFKYENVIP EFDLYGQIEP WDIWNQFGGN  60
KLEDGEDLYF FTKLKSSSAK NTRMARTIGS GSWKAENSGK KVPDPKDKKN DLGMWKRLHY  120
ENPKSDQNGC WIMHEYSLRP SLVKPKPNST HQFVVCRIRK NHSRKRKFKS TAANGIPSLQ  180
SQNKKQRQQE TSFDEYLIGS STPMSQAIGG GPTQSQSQQD CPFAYPITMV DDAIQFHGDF  240
LMGGFSPSVD SAQSFTEQAE FGSYNQERME CIEFDEPHAT QLGLTDNNIG AAATEESGCQ  300
FGSENSQPDN VDFSIDYGWL HHLIQVDDDD VTTATPSGSQ SIHQSAVDDE ERPASGLSSQ  360
SLTTESALEF GMSSSENHTG AQLGVGTESA QVNASEFQVH NEDMLDFLNT ASFDQLVDMF  420
QFHDDDEVQA FTTQSSVMGI IG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-19	NAC family protein