PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0006393.1_g030.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | EIL | ||||||||
Protein Properties | Length: 228aa MW: 26083.9 Da PI: 8.2115 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 174.9 | 8.2e-54 | 29 | 197 | 146 | 321 |
HHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTT CS EIN3 146 SLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeireler 229 SLL + qh p qrrfplekg++pPWWPtG+elww+ +g+s d+g+ppy+kphdlkk wkvs L+avikhm+p+++++++l+r Pav_sc0006393.1_g030.1.br 29 SLLTFQQQHYVPAQRRFPLEKGLAPPWWPTGEELWWDDKGVSIDHGAPPYRKPHDLKKDWKVSALAAVIKHMAPNSDRMKRLVR 112 9*********************************************************************************** PP TSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX...XXXXXXXX CS EIN3 230 qskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavktta...gfpvvrkr 310 qsk+lqdkm+ake ++++v+nqee++++ ++ +++s +++++ ++++ s ++++ +++ + ++p +kr Pav_sc0006393.1_g030.1.br 113 QSKCLQDKMTAKEIEIWSKVVNQEEALLQ----------LTETCLKISYSNEKEDQKESPSGLSQIKGKNNGKwmcSLPSSEKR 186 *************************9774..........245556667776666666666665555554444344455555555 PP XXXXXXXXXXX CS EIN3 311 kkkpsesakvs 321 + ++++++ Pav_sc0006393.1_g030.1.br 187 TSSIFDEEACQ 197 55555555554 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MIEPGSEAML EFCEEQMKKA KNTGRIKSSL LTFQQQHYVP AQRRFPLEKG LAPPWWPTGE 60 ELWWDDKGVS IDHGAPPYRK PHDLKKDWKV SALAAVIKHM APNSDRMKRL VRQSKCLQDK 120 MTAKEIEIWS KVVNQEEALL QLTETCLKIS YSNEKEDQKE SPSGLSQIKG KNNGKWMCSL 180 PSSEKRTSSI FDEEACQTGQ GLKSFELGLW FVDKKSKVDH ESVGVFIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10120.1 | 1e-58 | EIL family protein |