PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0004890.1_g010.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 256aa MW: 28141.3 Da PI: 4.57 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.8 | 6.1e-09 | 3 | 26 | 24 | 48 |
HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48 W++Ia++++ gRt++++k++w+++l Pav_sc0004890.1_g010.1.mk 3 WSAIASHLP-GRTDNEIKNFWNTHL 26 *********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MVWSAIASHL PGRTDNEIKN FWNTHLKKKL IQMGFDPMTH RPRTDIFSSL PHLLALVNLK 60 ELLDHGGHPS WDEQAVRLQA EAAQMARLQY LQCLLQPPTA NNSFGAGSPS NLNDITDMET 120 INLLSSLCSY QLDQNPPQYP GANFQPVQDH NSIPFSHLPD LQTYQTPSLN NKDMVNQAED 180 QLAVVLSQGQ NSPNNPWNIP SSSNTTPSPT SMAPPVAETS INNTMGDACS TSSFGGVANS 240 AWSELLLEDS FFNEIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 3e-43 | MYB family protein |